Job Description P0AG30 Confidence 100.00% Date Thu Jan 5 11:27:58 GMT 2012 Rank 10 Aligned Residues 313 % Identity 16% Template c2w6fA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp synthase subunit alpha heart isoform, PDBTitle: low resolution structures of bovine mitochondrial f1-atpase2 during controlled dehydration: hydration state 2. Resolution 6.00 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	R	T	G	D	T	I	S	G	K	I	R	P	P	K	E	G	E	R	Y	F	A	L	L	K	V	N	E	V	N	F	D	K	P	E	N	A	R	N	K	I	L	F	E	N	L	T	P	L	H	A	N	S	R	L	R	M	E	R	G	N	G	S	T	E	D	L	T	A	R	V	L	D	L	A	S	P	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	K	E	G	D	I	V	K	R	T	G	A	I	V	D	V	P	V	G	E	E	L	L	G	R	V	V	D	A	L	G	N	A	I	D	G	K	G	P	I	G	S	K	A	R	R	R	V	G	L	K	A	P	G	I	I	P	R	I	S	V	R	E	P	M	Q	T	G	I	K	A	V	D	S	L	V	P	I	G
Template Known Secondary structure		G			T	T															S	G	G	G	T	T					T	T	S		B		S	S	S											S	S						S	T	T	B					S					S								S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.							.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.								.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.																																	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.																																	.	.	.	.	.	.	.
Query Sequence		R	G	Q	R	G	L	I	V	A	P	P	K	A	G	K	T	M	L	L	Q	N	I	.	.	.	.	.	.	A	Q	S	I	A	Y	N	H	P	D	C	V	L	M	V	L	L	I	D	E	R	P	E	E	V	T	E	M	Q	R	L	V	.	.	.	.	.	.	.	K	G	E	V	V	A	S	T	F	D	E	P	A
Query Conservation																								.	.	.	.	.	.																																	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	Q	R	E	L	I	I	G	D	R	Q	T	G	K	T	S	I	A	I	D	T	I	I	N	Q	K	R	F	N	D	G	T	D	E	K	K	K	L	Y	C	I	Y	V	A	I	G	Q	K	R	S	T	V	A	Q	L	V	K	R	L	T	D	A	D	A	M	K	Y	T	I	V	V	S	A	T	A	S	D	A	A
Template Known Secondary structure		T	T		B						S	T	T	S	S												T					S	S	S		T	T	S										S																T	T		G	G	G								T	T	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.				310	.	.
Predicted Secondary structure																																																				.																								.	.	.
Query SS confidence																																																				.																								.	.	.
Query Sequence		S	R	H	V	Q	V	A	E	M	V	I	E	K	A	K	R	L	V	E	H	K	K	D	V	I	I	L	L	D	S	I	T	R	L	A	R	A	Y	N	T	V	V	P	A	S	G	K	V	L	T	.	G	G	V	D	A	N	A	L	H	R	P	K	R	F	F	G	A	A	R	N	V	E	E	.	.	.	G	G	S
Query Conservation																																																				.																								.	.	.
Alig confidence																																																				.																								.	.	.
Template Conservation
Template Sequence		P	L	Q	Y	L	A	P	Y	S	G	C	S	M	G	E	Y	F	R	D	N	G	K	H	A	L	I	I	Y	D	D	L	S	K	Q	A	V	A	Y	R	Q	M	S	L	L	L	R	R	P	P	G	R	E	A	Y	P	G	D	V	F	Y	L	H	S	R	L	L	E	R	A	A	K	M	N	D	A	F	G	G	G	S
Template Known Secondary structure																					T	T																								T	T			B		G	G	G		B	T	T										T	S			B	B		G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	I	I	A	T	A	L	I	D	T	G	S	K	M	D	E	V	I	Y	E	E	F	K	G	T	G	N	M	E	L	H	L	S	R	K	I	A	E	K	R	V	F	P	A	I	D	Y	N	R	S	G	T	R	K	E	E	L	L	T	T	Q	E	E	L	Q	K	M	W	I	L	R	K	I	I	H	P	M	G	E
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		L	T	A	L	P	V	I	E	T	Q	.	A	G	D	V	S	A	Y	I	P	T	N	V	I	S	I	T	D	G	Q	I	F	L	E	T	E	L	F	Y	K	G	I	R	P	A	I	N	V	G	L	S	V	S	R	V	G	S	A	A	Q	T	R	A	M	K	Q	V	A	G	T	M	K	L	E	L	A	Q	Y	R	E
Template Known Secondary structure											S	.	T	T		T	T	S										S	S					B								T		S	S		B		T	T	T				S	S	G	G	G	G	S
Template Predicted Secondary structure												.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	A	M	E	F	L	I	N	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	A	F	A	Q	F	G	S	D	L
Template Known Secondary structure			G	G	G	G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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