Job Description P0AG30 Confidence 100.00% Date Thu Jan 5 11:27:58 GMT 2012 Rank 9 Aligned Residues 307 % Identity 16% Template c2r9vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp synthase subunit alpha; PDBTitle: crystal structure of atp synthase subunit alpha (tm1612) from2 thermotoga maritima at 2.10 a resolution Resolution 2.10 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	R	T	G	D	T	I	S	G	K	I	R	P	P	K	E	G	E	R	Y	F	A	L	L	K	V	N	E	V	N	F	D	K	P	E	N	A	R	N	K	I	L	F	E	N	L	T	P	L	H	A	N	S	R	L	R	M	E	R	G	N	G	S	T	E	D	L	T	A	R	V	L	D	L	A	S	P	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	K	E	G	H	T	V	R	R	L	K	R	I	I	E	V	P	V	G	E	E	L	L	G	R	V	V	N	P	L	G	E	P	L	D	G	K	G	P	I	N	A	K	N	F	R	P	I	E	I	K	A	P	G	V	I	Y	R	K	P	V	D	T	P	L	Q	T	G	I	K	A	I	D	S	X	I	P	I	G
Template Known Secondary structure		T			T	T															S	G	G	G	T	T					T	T	S		B		S	S	S						S					S							G	G	G	B					S					S								S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.								.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.
Query Sequence		R	G	Q	R	G	L	I	V	A	P	P	K	A	G	K	T	M	L	L	Q	N	I	A	Q	S	I	A	Y	N	H	P	D	C	V	L	M	V	L	L	I	D	E	R	P	E	E	V	T	E	M	Q	R	L	V	.	.	.	.	.	.	.	K	G	E	V	V	A	S	T	F	D	E	P	A	S	R	H	V	Q	V
Query Conservation																																																								.	.	.	.	.	.	.
Alig confidence																									.	.																														.	.	.	.	.	.	.
Template Conservation																									.	.
Template Sequence		R	G	Q	R	E	L	I	I	G	D	R	Q	T	G	K	T	A	I	A	I	D	T	I	.	.	I	N	Q	K	G	Q	G	V	Y	C	I	Y	V	A	I	G	Q	K	K	S	A	I	A	R	I	I	D	K	L	R	Q	Y	G	A	X	E	Y	T	T	V	V	V	A	S	A	S	D	P	A	S	L	Q	Y	I	A
Template Known Secondary structure		T	T		B							T	T	S	S										.	.		T	T	T	T	T	T									S																T	T	G	G	G	G								T	T	S
Template Predicted Secondary structure																									.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.				310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.																								.	.	.
Query SS confidence																																														.																								.	.	.
Query Sequence		A	E	M	V	I	E	K	A	K	R	L	V	E	H	K	K	D	V	I	I	L	L	D	S	I	T	R	L	A	R	A	Y	N	T	V	V	P	A	S	G	K	V	L	T	.	G	G	V	D	A	N	A	L	H	R	P	K	R	F	F	G	A	A	R	N	V	E	E	.	.	.	G	G	S	L	T	I	I	A	T
Query Conservation																																														.																								.	.	.
Alig confidence																																														.																								.	.	.
Template Conservation
Template Sequence		P	Y	A	G	C	A	X	G	E	Y	F	A	Y	S	G	R	D	A	L	V	V	Y	D	D	L	S	K	H	A	V	A	Y	R	Q	L	S	L	L	X	R	R	P	P	G	R	E	A	Y	P	G	D	I	F	Y	L	H	S	R	L	L	E	R	A	V	R	L	N	D	K	L	G	G	G	S	L	T	A	L	P	I
Template Known Secondary structure														T	T	T									T														T	S				T	T																	T	T				B		T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	D	T	G	S	K	M	D	E	V	I	Y	E	E	F	K	G	T	G	N	M	E	L	H	L	S	R	K	I	A	E	K	R	V	F	P	A	I	D	Y	N	R	S	G	T	R	K	E	E	L	L	T	T	Q	E	E	L	Q	K	M	W	I	L	R	K	I	I	H	P	M	G	E	I	D	A	M	E	F
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		V	E	T	Q	.	A	N	D	I	S	A	Y	I	P	T	N	V	I	S	I	T	D	G	Q	I	Y	L	E	P	G	L	F	Y	A	G	Q	R	P	A	I	N	V	G	L	S	V	S	R	V	G	G	S	A	Q	I	K	A	X	K	Q	V	A	G	X	L	R	I	D	L	A	Q	Y	R	E	L	E	T	F	A	Q
Template Known Secondary structure					S	.	T	T		T	T	S									T	S	S					B								T		S	S		B		T	T	T				G	G	G	T	T	T	S																							T	T	G	G
Template Predicted Secondary structure						.
Template SS confidence
		320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		399
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		399

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions