Job Description P0AG30 Confidence 100.00% Date Thu Jan 5 11:27:58 GMT 2012 Rank 6 Aligned Residues 326 % Identity 16% Template c2jizD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:atp synthase subunit beta; PDBTitle: the structure of f1-atpase inhibited by resveratrol. Resolution 2.3 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	R	T	G	D	T	I	S	G	K	I	R	P	P	K	E	G	E	R	Y	F	A	L	L	K	V	N	E	V	N	F	D	K	P	E	N	A	R	N	K	I	L	F	E	N	L	T	P	L	H	A	N	S	R	L	R	M	E	R	G	N	G	S	T	E	D	L	T	A	R	V	L	D	L	A	S	P	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	V	R	G	Q	K	V	L	D	S	G	A	P	I	R	I	P	V	G	P	E	T	L	G	R	I	M	N	V	I	G	E	P	I	D	E	R	G	P	I	K	T	K	Q	F	A	A	I	H	A	E	A	P	E	F	V	E	M	S	V	E	Q	E	I	L	V	T	G	I	K	V	V	D	L	L	A	P	Y	A
Template Known Secondary structure		T			T	T							S	S	S						S	G	G	G	T	T					T	T	S		B		S	S	S						S					S							G	G	G											S								S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.														.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	G	Q	R	G	L	I	V	A	P	P	K	A	G	K	T	M	L	L	Q	N	I	A	Q	S	I	A	Y	N	H	P	D	C	V	L	M	V	L	L	I	D	E	R	P	E	E	V	T	E	M	Q	R	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	E	V	V	A	S	T	F	D	E	P	A
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		K	G	G	K	I	G	L	F	G	G	A	G	V	G	K	T	V	L	I	M	E	L	I	N	N	V	A	K	A	H	G	G	.	Y	S	V	F	A	G	V	G	E	R	T	R	E	G	N	D	L	Y	H	E	M	I	E	S	G	V	I	N	L	K	D	A	T	S	K	V	A	L	V	Y	G	Q	M	N	E	P	P
Template Known Secondary structure		T	T								S	T	T	S	S													T	T	T		S	S	.								S	S																T	S	S		S	S	S	S											T	T	S
Template Predicted Secondary structure																																		.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																						.																															.
Query SS confidence																						.																															.
Query Sequence		S	R	H	V	Q	V	A	E	M	V	I	E	K	A	K	R	L	V	E	H	.	K	K	D	V	I	I	L	L	D	S	I	T	R	L	A	R	A	Y	N	T	V	V	P	A	S	G	K	V	L	T	.	G	G	V	D	A	N	A	L	H	R	P	K	R	F	F	G	A	A	R	N	V	E	E	G	G	S	L	T
Query Conservation																						.																															.
Alig confidence																						.																															.																								.
Template Conservation																																																																													.
Template Sequence		G	A	R	A	R	V	A	L	T	G	L	T	V	A	E	Y	F	R	D	Q	E	G	Q	D	V	L	L	F	I	D	N	I	F	R	F	T	Q	A	G	S	E	V	S	A	L	L	G	R	I	P	S	A	V	G	Y	Q	P	T	L	A	T	D	M	G	T	M	Q	E	R	I	T	T	T	K	K	.	G	S	I	T
Template Known Secondary structure																					S	S											T											T	T	T	T	T					G	G	G			T	T										T	T	S	S			S	S	.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		I	I	A	T	A	L	I	D	T	G	S	K	M	D	E	V	I	Y	E	E	F	K	G	T	G	N	M	E	L	H	L	S	R	K	I	A	E	K	R	V	F	P	A	I	D	Y	N	R	S	G	T	R	K	E	E	.	L	L	T	T	Q	E	E	L	Q	K	M	W	I	L	R	K	I	I	H	P	M	G	E	I
Query Conservation																																																									.
Alig confidence										.																																															.
Template Conservation										.
Template Sequence		S	V	Q	A	I	Y	V	P	.	A	D	D	L	T	D	P	A	P	A	T	T	F	A	H	L	D	A	T	T	V	L	S	R	A	I	A	E	L	G	I	Y	P	A	V	D	P	L	D	S	T	S	R	I	M	D	P	N	I	V	G	S	E	H	Y	D	V	A	R	G	V	Q	K	I	L	Q	D	Y	K	S	L
Template Known Secondary structure									G	.	G	G		T	T	S							G	G	G		S					B						T	T	T		S	S		B		T	T	S				T	T		S
Template Predicted Secondary structure										.
Template SS confidence
		306	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	M	E	F	L	I	N	K	L	A	M	T	K	T	N	D	D	F	F	E	M	M	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	D	I	I	A	I	L	G	M	D	E	L	S	E	E	D	K	L	T	V	S	R	A	R	K
Template Known Secondary structure										S	T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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