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Job Description | P0AG30 | Confidence | 96.66% | Date | Thu Jan 5 11:27:58 GMT 2012 |
Rank | 90 | Aligned Residues | 88 |
% Identity | 13% | Template | c2j37W_ |
PDB info |
PDB header:ribosome | Chain: W: PDB Molecule:signal recognition particle 54 kda protein |
PDBTitle: model of mammalian srp bound to 80s rncs
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Resolution | 8.00 Å |
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169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
G | R | G | Q | R | G | L | I | V | A | P | P | K | A | G | K | T | M | L | L | Q | N | I | A | Q | S | I | A | Y | N | H | P | D | C | V | L | M | V | L | L | I | D | E | R | P | E | E | V | T | E | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | K | G | N | V | I | M | F | V | G | L | Q | G | S | G | K | T | T | T | C | S | K | L | A | Y | Y | Y | Q | R | K | G | W | K | . |
T | C | L | I | C | A | D | T | F | R | A | G | A | F | D | Q | L | K | Q | N | A | T | K | A | R | I | P | F | Y | G | S | Y | T | E | M | D | P | V | I | I | A | S | E | G | V | . |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | |
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246 | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | I | E | K | A | K | R | L | V | E | H | K | K | D | V | I | I | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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E | K | F | K | N | E | N | F | E | I | I | I | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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177 | . | . | 180 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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