Job Description P0AG30 Confidence 100.00% Date Thu Jan 5 11:27:58 GMT 2012 Rank 18 Aligned Residues 338 % Identity 16% Template c2c61A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:a-type atp synthase non-catalytic subunit b; PDBTitle: crystal structure of the non-catalytic b subunit of a-type2 atpase from m. mazei go1 Resolution 1.5 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	S	P	S	Q	I	R	R	F	N	L	R	T	G	D	T	I	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	R	P	P	K	E	G	E	R	Y	F	A	L	L	K	V	N	E	V	N	F	D	K	P	E	N	A	R	N	K	I	L	F	E	N	L	T	P	L	H	A	N	S
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	G	Y	N	E	I	V	N	I	K	M	G	D	G	T	V	R	R	G	Q	V	L	D	S	S	A	D	I	V	V	V	Q	V	F	F	T	G	E	T	L	K	L	P	A	S	V	D	L	L	G	R	I	L	S	G	S	G	E	P	R	D	G	G	P	R	I	V	P	D	Q	L	L	D	I	N	G	A	A	M
Template Known Secondary structure					T	T								T	T	S												S	S												B							G	G	G	T	T					T	T	S		B	S	S	S							S					S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		R	L	R	M	E	R	G	N	G	S	T	E	D	L	T	A	R	V	L	D	L	A	S	P	I	G	R	G	Q	R	G	L	I	V	A	P	P	K	A	G	K	T	M	L	L	Q	N	I	A	Q	S	.	.	I	A	Y	N	H	P	D	C	V	L	M	V	L	L	I	D	E	R	P	E	E	V	T	E	M	Q	R
Query Conservation																																																					.	.
Alig confidence																																																					.	.
Template Conservation
Template Sequence		N	P	Y	A	R	L	P	P	K	D	F	I	Q	T	G	I	S	T	I	D	G	T	N	T	L	V	R	G	Q	K	L	P	I	F	S	A	S	G	L	P	H	N	E	I	A	L	Q	I	A	R	Q	A	S	V	P	G	S	E	S	A	F	A	V	V	F	A	A	M	G	I	T	N	E	E	A	Q	Y	F	M	S
Template Known Secondary structure				B		S					S	B		B		S						T	T	S			B	T	T		B							T	T	S														B		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		222	.								.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.
Predicted Secondary structure				.	.	.	.	.	.	.																																.																																	.
Query SS confidence				.	.	.	.	.	.	.																																.																																	.
Query Sequence		L	V	.	.	.	.	.	.	.	K	G	E	V	V	A	S	T	F	D	E	P	A	S	R	H	V	Q	V	A	E	M	V	I	E	K	A	K	R	L	V	.	E	H	K	K	D	V	I	I	L	L	D	S	I	T	R	L	A	R	A	Y	N	T	V	V	P	A	S	G	K	V	L	T	.	G	G	V	D	A	N
Query Conservation				.	.	.	.	.	.	.																																.																																	.
Alig confidence				.	.	.	.	.	.	.																																.																																	.
Template Conservation
Template Sequence		D	F	E	K	T	G	A	L	E	R	A	V	V	F	L	N	L	A	D	D	P	A	V	E	R	I	V	T	P	R	M	A	L	T	A	A	E	Y	L	A	Y	E	H	G	M	H	V	L	V	I	L	T	D	I	T	N	Y	A	E	A	L	R	Q	M	G	A	A	R	N	E	V	P	G	R	R	G	Y	P	G	Y
Template Known Secondary structure							S	G	G	G	G								T	T	S																																										T	T	S	G	G	G	T	T			T	T	S	T	T			T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		A	L	H	R	P	K	R	F	F	G	A	A	R	N	V	E	E	.	G	G	S	L	T	I	I	A	T	A	L	I	D	T	G	S	K	M	D	E	V	I	Y	E	E	F	K	G	T	G	N	M	E	L	H	L	S	R	K	I	A	E	K	R	V	F	P	A	I	D	Y	N	R	S	G	T	R	K	E	E	L	L
Query Conservation																			.
Alig confidence																			.														.
Template Conservation																																	.
Template Sequence		M	Y	T	D	L	A	T	L	Y	E	R	A	G	I	V	K	G	A	K	G	S	V	T	Q	I	P	I	L	S	M	P	.	G	D	D	I	T	H	P	I	P	D	L	S	G	Y	I	T	E	G	Q	I	V	V	A	R	E	L	H	R	K	G	I	Y	P	P	I	N	V	L	P	S	L	S	R	L	M	N	S	G
Template Known Secondary structure											T	S				B	T	T	S	S													.	S		T	T	T	S						G	G	G	G	T	T					B							T	T		S	S		B		T	T	T				T	T	G	G	G	S
Template Predicted Secondary structure																																	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		372	.						.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.
Query SS confidence				.	.	.	.	.
Query Sequence		T	T	.	.	.	.	.	Q	E	E	L	Q	K	M	W	I	L	R	K	I	I	H	P	M	G	E	I	D	A	M	E	F	L	I	N	K	L	A	M	T	K	T	N	D	D	F	F	E	M	M	K	R
Query Conservation				.	.	.	.	.
Alig confidence				.	.	.	.	.
Template Conservation
Template Sequence		I	G	A	G	K	T	R	E	D	H	K	A	V	S	D	Q	M	Y	A	G	Y	A	E	G	R	D	L	R	G	L	V	A	I	V	G	K	E	A	L	S	E	R	D	T	K	F	L	E	F	A	D	L
Template Known Secondary structure			S	T	T	T	S		T	T																											G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions