Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG30
Confidence95.95%DateThu Jan 5 11:27:58 GMT 2012
Rank149Aligned Residues47
% Identity15%Templatec1ojlF_
PDB info PDB header:response regulatorChain: F: PDB Molecule:transcriptional regulatory protein zrar; PDBTitle: crystal structure of a sigma54-activator suggests the2 mechanism for the conformational switch necessary for3 sigma54 binding
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160.........170... ......180.........190.........200.....
Predicted Secondary structure 






.











Query SS confidence 














.































Query Sequence  ARVLDLASPIGRGQR. GLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLM
Query Conservation   



   






. 

 
  
 





  

            
Alig confidence 














.































Template Conservation    
   
         


 







 

  

             
Template Sequence  QHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACSARSDRPLVTL
Template Known Secondary structure 
STT



TTSSSS
SSS


Template Predicted Secondary structure 

















Template SS confidence 















































   149150.........160.........170.........180.........190......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions