Job Description P0AG30 Confidence 100.00% Date Thu Jan 5 11:27:58 GMT 2012 Rank 15 Aligned Residues 325 % Identity 16% Template c1kmhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atpase alpha subunit; PDBTitle: crystal structure of spinach chloroplast f1-atpase2 complexed with tentoxin Resolution 3.40 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	E	I	L	Q	D	G	F	G	F	L	R	S	A	D	S	S	Y	L	A	G	P	D	D	I	Y	V	S	P	S	Q	I	R	R	F	N	L	R	T	G	D	T	I	S	G	K	I	R	P	P	K	E	G	E	R	Y	F	A	L	L	K	V	N	E	V	N	F	D	K	P	E	N	A	R	N	K	I	L	F
Query Conservation
Alig confidence																																				.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	N	L	E	S	N	N	V	G	V	V	L	M	G	D	G	L	M	I	Q	E	G	S	S	V	K	A	T	G	R	I	A	Q	.	.	.	I	P	V	S	E	A	Y	L	G	R	V	I	N	A	L	A	K	.	.	.	.	.	.	.	.	.	.	P	I	D	G	R	G	E	I	T	A	S	E	S	R	L	I
Template Known Secondary structure							S	S							S	S		G	G	G			T	T								S			B	.	.	.			B	S	S	S		S	S			B		S	S	S		.	.	.	.	.	.	.	.	.	.	B	S	S	S	S						S	B			B	S
Template Predicted Secondary structure																																				.	.	.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.											.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	L	T	P	L	H	A	N	S	R	L	R	M	E	R	G	N	G	S	T	E	D	L	T	A	R	V	L	D	L	A	S	P	I	G	R	G	Q	R	G	L	I	V	A	P	P	K	A	G	K	T	M	L	L	Q	N	I	A	Q	S	I	A	Y	N	H	P	D	C	V	L	M	V	L	L	I	D	E	R	P
Query Conservation
Alig confidence								.	.	.	.	.																																																	.	.
Template Conservation								.	.	.	.	.																																																	.	.
Template Sequence		E	S	P	A	P	G	.	.	.	.	.	I	M	S	R	R	S	V	Y	E	P	L	Q	T	G	L	I	A	I	D	A	M	I	P	V	G	R	G	Q	R	E	L	I	I	G	D	R	Q	T	G	K	T	A	V	A	T	D	T	I	.	.	L	N	Q	Q	G	Q	N	V	I	C	V	Y	V	A	I	G	Q	K	A
Template Known Secondary structure		S						.	.	.	.	.	S	T	T	B										S		T	T	T	T	T	T	S				T	T				B					T	T	S	S										.	.		T			T	T	T									S
Template Predicted Secondary structure								.	.	.	.	.																																																	.	.
Template SS confidence
		131	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		214	.	.	.	.	.	220	.	.	.								.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		E	E	V	T	E	M	Q	R	L	V	.	.	.	.	.	.	.	K	G	E	V	V	A	S	T	F	D	E	P	A	S	R	H	V	Q	V	A	E	M	V	I	E	K	A	K	R	L	V	E	H	K	K	D	V	I	I	L	L	D	S	I	T	R	L	A	R	A	Y	N	T	V	V	P	A	S	G	K	V	L	T
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	V	A	Q	V	V	T	N	F	Q	E	R	G	A	M	E	Y	T	I	V	V	A	E	T	A	D	S	P	A	T	L	Q	Y	L	A	P	Y	T	G	A	A	L	A	E	Y	F	M	Y	R	E	R	H	T	L	I	I	Y	D	D	L	S	K	Q	A	Q	A	Y	R	Q	M	S	L	L	L	R	R	P	P	G
Template Known Secondary structure										T	T	T	T	T	T	G	G	G	S								S	S	S		S	T	T	T	T															T	T	T										S														T	T
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
			287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.				310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure		.																								.	.	.
Query SS confidence		.																								.	.	.
Query Sequence		.	G	G	V	D	A	N	A	L	H	R	P	K	R	F	F	G	A	A	R	N	V	E	E	.	.	.	G	G	S	L	T	I	I	A	T	A	L	I	D	T	G	S	K	M	D	E	V	I	Y	E	E	F	K	G	T	G	N	M	E	L	H	L	S	R	K	I	A	E	K	R	V	F	P	A	I	D	Y	N	R
Query Conservation		.																								.	.	.
Alig confidence		.																								.	.	.														.
Template Conservation																																										.
Template Sequence		R	E	A	Y	P	G	D	V	F	Y	L	H	S	R	L	L	E	R	A	A	K	L	S	S	L	L	G	E	G	S	M	T	A	L	P	I	V	E	T	Q	.	A	G	D	V	S	A	Y	I	P	T	N	V	I	S	I	T	D	G	Q	I	F	L	S	A	D	L	F	N	A	G	I	R	P	A	I	N	V	G	I
Template Known Secondary structure		G	G	G			S		S	S	T	T					T	T	S		S	B	B		T	T	T	T	S												S	.	T	T		T	T	S								T	T	S	S	B	B					S	S	S	S	T	T	S		S	S				T	T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	T	R	K	E	E	L	L	T	T	Q	E	E	L	Q	K	M	W	I	L	R	K	I	I	H	P	M	G	E	I	D	A	M	E	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	S	R	V	G	S	A	A	Q	I	K	A	M	K	K	V	A	G	K	L	K	L	E	L	A	Q	F	A	E	L	E	A	F	A	Q	F
Template Known Secondary structure				B	T	T		G	G	G	S																						G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions