 |
| Job Description | P0AF61 | | Confidence | 2.87% | Date | Wed Jan 25 15:20:33 GMT 2012 |
| Rank | 64 | Aligned Residues | 30 |
| % Identity | 10% | Template | c1zp2A_ |
| PDB info |
PDB header:transcription/cell cycle | Chain: A: PDB Molecule:rna polymerase ii holoenzyme cyclin-like subunit; |
PDBTitle: structure of the mediator subunit cyclin c
|
| Resolution | 3.00 Å |
|
| | |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | |
|
|
|
|
|
|
|
|
|  | | | | |  | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
E | D | L | I | R | L | K | C | L | D | L | P | D | I | D | F | D | L | N | I | M | T | V | D | D | Y | F | R | Q | F |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
| | | |
| | |
|
| | |
| |
| |
| | | | |
| | | |
| | | |
| Template Sequence | |
S | N | I | S | E | I | E | F | E | I | I | S | V | L | D | A | F | L | I | V | H | H | P | Y | T | S | L | E | Q | A |
| Template Known Secondary structure | |
| | | | | | | | | | | | | T | T | T |
|
|
|
|
|
| T | | | | | | | |
| Template Predicted Secondary structure | |
| | | | | | | | | | | | | |
|
|
|
|
|
|
|
| | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
