Return to main results Retrieve Phyre Job Id

Job DescriptionP52097
Confidence63.65%DateThu Jan 5 12:05:18 GMT 2012
Rank111Aligned Residues104
% Identity12%Templated1vl1a_
SCOP infoNagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like NagB-like
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.. .......50.........60.........70. ........
Predicted Secondary structure 
















.







...


Query SS confidence 






































.




























. . .







Query Sequence  TLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGV. ALRAIHVHHGLSANADAWVTHCENVCQQW. . . QVPLVVER
Query Conservation      
     




 


 

  

  
          . 
   



 

  
      
       ... 
      
Alig confidence 






























...




.










..















...







Template Conservation   
   
       
 






   
  
  ...    
  
  
  


 ..
      

       
     

   
Template Sequence  KMEKLLEEKDKIFVVLAGGRTPLPVYEKLAE. . . QKFPWNRIHFFLSDERY. . VPLDSDQSNFRNINEVLFSRAKIPSGN
Template Known Secondary structure 
S


STTTT...S


GGGSS..S
TTSTT
TTTTS


GGG
Template Predicted Secondary structure 







...








..










Template SS confidence 















































































   24.....30.........40.........50.... .....60.........70. ........80.........90........
 
   80.........90.........100....... ..110....
Predicted Secondary structure 





.

Query SS confidence 



























.






Query Sequence  VQLAQEGLGIEAQARQARYQAFARTLLP. GEVLVTA
Query Conservation            
  

  

         .   
  
Alig confidence 














..










.






Template Conservation 
              .. 

  
       

 


Template Sequence  VHYVDTSLPIEKACE. . KYEREIRSATDQFDLAILG
Template Known Secondary structure 


TTS
..
SS
S
Template Predicted Secondary structure 






..





Template SS confidence 



































   99100.........110... ......120.........130..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions