 |
Job Description | P52097 | Confidence | 77.74% | Date | Thu Jan 5 12:05:18 GMT 2012 |
Rank | 84 | Aligned Residues | 76 |
% Identity | 14% | Template | c3nrbD_ |
PDB info |
PDB header:hydrolase | Chain: D: PDB Molecule:formyltetrahydrofolate deformylase; |
PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (puru,2 pp_1943) from pseudomonas putida kt2440 at 2.05 a resolution
|
Resolution | 2.05 Å |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | S | R | Q | I | L | V | A | F | S | G | G | L | D | S | T | V | L | L | H | Q | L | V | Q | W | R | T | E | N | P | G | V | A | L | R | A | I | H | V | H | H | G | L | S | A | N | A | D | A | W | V | T | H | C | E | N | V | C | Q | Q | W | Q | V | P | L | V | V | E | R | V | Q | L | A | Q | E | G | L | G | I | E |
Query Conservation |   |
  |   |   |
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|   |
| . | . |   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|
|
|   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
D | R | K | K | V | V | I | X | V | S | K | F | D | . |
. |
H | C | L | G | D | L | L | Y | R | H | R | L | G | E | L | D | X | E | V | V | G | I | I | S | N | H | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | E | A | L | S | V | S | L | V | G | D | I | P | F | H | Y | L | P | V | T | P | A | T | K | A | A | Q | E | S |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |
| S |
|
| . | . |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|
|  |  |  |  |  |  |  | S | S |
| . | . | . | . | . | . | . | . | . | G | G | G |
|
|
|
|
|
| T | T | S |
|  |  |  |
|
|
|
| G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
  |
  |   |
91 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | A | R | Q | A | R |
Query Conservation |   |
  |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
Template Sequence |   |
Q | I | K | N | I | V | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
155 | . | . | . | . | 160 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|