Job Description P52097 Confidence 99.93% Date Thu Jan 5 12:05:18 GMT 2012 Rank 8 Aligned Residues 167 % Identity 17% Template c3k32D_ PDB info PDB header:transferase Chain: D: PDB Molecule:uncharacterized protein mj0690; PDBTitle: the crystal structure of predicted subunit of trna2 methyltransferase from methanocaldococcus jannaschii dsm Resolution 2.50 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.										.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.
Query Sequence		I	L	V	A	F	S	G	G	L	D	S	T	V	L	L	H	Q	L	V	Q	W	R	T	E	N	P	G	V	A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	Q	V	P	L	V	V	E	R	V	Q	L	A	.	.	.	.	.	.	.	.	.	Q	E
Query Conservation																																																																							.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.																			.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.																			.	.	.	.
Template Sequence		V	H	V	L	F	S	G	G	K	D	S	S	L	S	A	V	I	L	K	K	.	.	.	.	.	L	G	Y	N	P	H	L	I	T	I	N	F	G	V	I	P	S	Y	.	.	.	.	K	L	A	E	E	T	A	K	I	L	G	F	K	H	K	V	I	T	L	D	R	K	I	V	E	K	A	A	D	X	I	I	E
Template Known Secondary structure								S	S													.	.	.	.	.	T	T											S	S	S		T	T	.	.	.	.											T
Template Predicted Secondary structure																						.	.	.	.	.																			.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	G	I	E	A	Q	A	R	Q	A	R	Y	Q	A	F	A	R	T	L	L	P	G	E	V	L	V	T	A	Q	H	L	D	D	Q	C	E	T	F	L	L	A	L	K	R	G	S	G	P	A	G	L	S	A	M	A	E	V	S	E	F	A	G	T	R	L	I	R	P	L	L	A	R	T	R	G	E	L	V	Q
Query Conservation
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	K	Y	P	G	P	A	I	Q	Y	V	H	K	T	V	L	E	I	L	A	D	E	Y	S	I	L	A	D	G	T	R	R	D	D	R	V	P	K	L	S	Y	S	E	I	Q	S	L	E	X	R	K	N	I	Q	.	.	.	.	.	.	.	.	.	.	.	Y	I	T	P	L	X	G	F	G	Y	K	T	L	R	H
Template Known Secondary structure			S	S	S																T	T	T		S								T	T			S	S																		.	.	.	.	.	.	.	.	.	.	.				G	G	G	G
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130												.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	R	Q	Y	D	L	R	W	I	E	D	E	S	N	Q	D	D	S	Y	D	R	N	F	L	R	L	R	V	V	P	L	L	Q	Q	R	W	P	H
Query Conservation
Alig confidence							.																										.	.
Template Conservation							.																										.	.
Template Sequence		L	A	S	E	F	.	F	I	L	E	E	I	S	S	D	Y	E	A	E	I	R	H	I	L	K	E	R	G	E	S	P	.	.	E	K	Y	F	P	E
Template Known Secondary structure							.								T	T	T												T			G	.	.	G	G	T
Template Predicted Secondary structure							.																										.	.
Template SS confidence
		146	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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