Job Description P52097 Confidence 21.34% Date Thu Jan 5 12:05:18 GMT 2012 Rank 181 Aligned Residues 99 % Identity 19% Template c3jr7A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized egv family protein cog1307; PDBTitle: the crystal structure of the protein of degv family cog1307 with2 unknown function from ruminococcus gnavus atcc 29149 Resolution 2.00 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.																80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	.	Q	V	P	L	V	V	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	L	A	Q	E	G	L	G	I	E	A	Q	A	R	Q	A	R	Y	Q	A	F	A	R	T	L	L
Query Conservation																															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.
Template Sequence		R	I	Y	V	V	T	L	S	A	E	L	S	G	S	Y	N	S	A	V	L	G	K	N	L	Y	E	E	E	Y	G	E	K	Q	I	H	V	F	N	S	R	S	A	S	V	G	E	T	L	I	A	L	K	V	Q	Q	C	E	K	A	G	X	T	F	E	E	V	V	.	.	.	.	.	E	S	V	E	C	Y	I	E
Template Known Secondary structure								S		T	T	T		S																											S	S		T																T	T								.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	E	V	L	V	T	A	Q	H	L	D	D	Q	C	E	T	F	L	L	A	L	K	R	G	S	G	P	A	G	L	S	A	M	A	E	V	S	E	F	A	G	T	R	L	I	R	P	L	L	A	R	T	R	G
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Sequence		E	Q	H	T	Y	F	V	L	E	N	L	D	T	.	.	.	.	.	.	.	.	L	R	K	N	G	R	L	T	G	I	K	S	.	.	.	.	.	.	.	A	G	A	L	N	I	K	P	I	X	G	S	T	P	Q
Template Known Secondary structure										S					.	.	.	.	.	.	.	.				T	T		S	T	T				.	.	.	.	.	.	.				T	T									T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.									.	.	.	.	190	.	.	.	.	.	.	.								.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions