Return to main results Retrieve Phyre Job Id

Job DescriptionP52097
Confidence98.93%DateThu Jan 5 12:05:18 GMT 2012
Rank44Aligned Residues141
% Identity19%Templatec3dpiA_
PDB info PDB header:ligaseChain: A: PDB Molecule:nad+ synthetase; PDBTitle: crystal structure of nad+ synthetase from burkholderia pseudomallei
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30..... ....40.........50.........60.........70.........
Predicted Secondary structure 





..














...........
Query SS confidence 






















. .











































. . . . . . . . . . .
Query Sequence  RQILVAFSGGLDSTVLLHQLVQW. . RTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVER. . . . . . . . . . .
Query Conservation   




 


 

  

  
   ..        
   



 

  
      
        
      ...........
Alig confidence 






















..


























....












...........
Template Conservation    












 
 
   
 
     
                  
 
.... 
  


    
 
          
Template Sequence  RACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYGAEADARRA. . . . LAFVRADETLTVDVKPAADAMLAA
Template Known Secondary structure 


SSTT




S


....

S


Template Predicted Secondary structure 



















....



Template SS confidence 















































































   46...50.........60.........70.........80.........90....... ..100.........110.........120.
 
   80.........90.........100.........110.........120.........130.........140.........150.
Predicted Secondary structure  ........
























Query SS confidence  . . . . . . . .







































































Query Sequence  . . . . . . . . VQLAQEGLGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRL
Query Conservation  ........          
  

  

            
  

  

  

 
  
 

    

  
          
Alig confidence  ........









































.













...............
Template Conservation 
                  
  

 
   
   
     

 




 
 .  

 

 

   
...............
Template Sequence  LAAGGLAYLDHAQQDFVLGNIKARERMIAQYAVAGARNGVVIGTDHAAES. VMGFFTKFGDGGAD. . . . . . . . . . . . . . .
Template Known Secondary structure  TT




TTB



.






S...............
Template Predicted Secondary structure 
















.









...............
Template SS confidence 















































































   125....130.........140.........150.........160.........170.... .....180........
 
   152.......160.........170...
Predicted Secondary structure 










Query SS confidence 





















Query Sequence  IRPLLARTRGELVQWARQYDLR
Query Conservation 




   
 

  
     
 
Alig confidence 





















Template Conservation 
 

  
 
 


 

  



Template Sequence  VLPLAGLTKRRVRALARMLGAD
Template Known Secondary structure  B
TTTT

TT

Template Predicted Secondary structure 










Template SS confidence 





















   189190.........200.........210
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions