Job Description P52097 Confidence 98.93% Date Thu Jan 5 12:05:18 GMT 2012 Rank 44 Aligned Residues 141 % Identity 19% Template c3dpiA_ PDB info PDB header:ligase Chain: A: PDB Molecule:nad+ synthetase; PDBTitle: crystal structure of nad+ synthetase from burkholderia pseudomallei Resolution 2.20 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	I	L	V	A	F	S	G	G	L	D	S	T	V	L	L	H	Q	L	V	Q	W	.	.	R	T	E	N	P	G	V	A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	Q	V	P	L	V	V	E	R	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.																												.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		R	A	C	V	L	G	I	S	G	G	I	D	S	S	T	A	G	R	L	A	Q	L	A	V	E	R	L	R	A	S	G	Y	D	A	R	F	V	A	M	R	L	P	Y	G	A	E	A	D	A	R	R	A	.	.	.	.	L	A	F	V	R	A	D	E	T	L	T	V	D	V	K	P	A	A	D	A	M	L	A	A
Template Known Secondary structure										S	S																				T	T												S										.	.	.	.							S
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
										80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	V	Q	L	A	Q	E	G	L	G	I	E	A	Q	A	R	Q	A	R	Y	Q	A	F	A	R	T	L	L	P	G	E	V	L	V	T	A	Q	H	L	D	D	Q	C	E	T	F	L	L	A	L	K	R	G	S	G	P	A	G	L	S	A	M	A	E	V	S	E	F	A	G	T	R	L
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																											.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	A	G	G	L	A	Y	L	D	H	A	Q	Q	D	F	V	L	G	N	I	K	A	R	E	R	M	I	A	Q	Y	A	V	A	G	A	R	N	G	V	V	I	G	T	D	H	A	A	E	S	.	V	M	G	F	F	T	K	F	G	D	G	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T																																T	T				B									.														S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	P	L	L	A	R	T	R	G	E	L	V	Q	W	A	R	Q	Y	D	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	P	L	A	G	L	T	K	R	R	V	R	A	L	A	R	M	L	G	A	D
Template Known Secondary structure		B		T	T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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