Job Description P52097 Confidence 43.56% Date Thu Jan 5 12:05:18 GMT 2012 Rank 139 Aligned Residues 56 % Identity 7% Template c3dm5A_ PDB info PDB header:rna binding protein, transport protein Chain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus. Resolution 2.51 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	V	A	F	S	G	G	L	D	S	T	V	L	L	H	Q	L	V	Q	W	R	T	E	N	P	G	V	A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	Q	V	P	L	V
Query Conservation
Alig confidence																										.	.												.	.	.	.
Template Conservation																										.	.												.	.	.	.
Template Sequence		L	M	V	G	I	Q	G	S	G	K	T	T	T	V	A	K	L	A	R	Y	F	Q	K	R	.	.	G	Y	K	V	G	V	V	C	S	D	T	.	.	.	.	W	R	P	G	A	Y	H	Q	L	R	Q	L	L	D	R	Y	H	I	E	V	F
Template Known Secondary structure							T	T	S	S														T	T	.	.	T											.	.	.	.	S	S	T											G	G	G	T
Template Predicted Secondary structure																										.	.												.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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