Job Description P52097 Confidence 97.57% Date Thu Jan 5 12:05:18 GMT 2012 Rank 55 Aligned Residues 133 % Identity 17% Template c3dlaD_ PDB info PDB header:ligase Chain: D: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																								.																																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																																																.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	I	L	V	A	F	S	G	G	L	D	S	T	V	L	L	H	Q	L	V	Q	.	W	R	T	E	N	P	G	V	A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	Q	V	P	L	V	V	E	R	V	Q	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.																																																.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																						.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.
Template Sequence		P	K	V	V	I	G	V	S	G	G	L	D	S	T	H	A	L	I	V	A	T	H	A	M	D	R	E	G	R	P	R	S	D	I	L	A	F	A	L	P	G	F	N	N	.	.	.	.	.	.	.	.	A	I	K	L	A	R	A	L	G	V	T	F	S	E	I	D	I	G	D	T	A	R	L	M	L	H	T	I
Template Known Secondary structure										S	S																	T	T			G	G	G												.	.	.	.	.	.	.	.									T								T											T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.									.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
									82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	L	A	Q	E	G	L	G	I	E	A	Q	A	R	Q	A	R	Y	Q	A	F	A	R	T	L	L	P	G	E	V	L	V	T	A	Q	H	L	D	D	Q	C	E	T	F	L	L	A	L	K	R	G	S	G	P	A	G	L	S	A	M	A	E	V	S	E	F	A	G	T	R	L	I	R	P
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Sequence		G	H	P	Y	S	V	G	E	K	V	Y	D	V	T	F	E	N	V	Q	A	G	L	R	T	D	Y	L	F	R	I	A	N	Q	R	G	G	I	V	L	G	T	G	D	L	S	E	L	.	.	.	.	.	.	.	.	.	.	.	.	A	L	G	W	S	T	Y	G	V	G	D	Q	M	S	H	.	.	.	Y	N	V
Template Known Secondary structure		T		G	G	G	G	T																												T													.	.	.	.	.	.	.	.	.	.	.	.			T		S			S	S	S	T	T			S	.	.	.			S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.													.	.	.	490	.	.	.	.	.	.	.	.	.	500	.				.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	R	T	R	G	E	L	V	Q	W	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	G	V	P	K	T	L	I	Q	H	L	I	R
Template Known Secondary structure		S	T	T
Template Predicted Secondary structure
Template SS confidence
		505	.	.	.	.	510	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions