Job Description P52097 Confidence 39.20% Date Thu Jan 5 12:05:18 GMT 2012 Rank 146 Aligned Residues 103 % Identity 12% Template c2j289_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs Resolution 8.0 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	V	A	F	S	G	G	L	D	S	T	V	L	L	H	Q	L	V	Q	W	R	T	E	N	P	G	V	A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	Q	V	P	L	V	V	E	R	V	Q	L	A	Q	E	G	L	G	I	E	A	Q	A	R
Query Conservation
Alig confidence																										.													.	.	.	.																						.	.	.	.	.
Template Conservation																										.													.	.	.	.																						.	.	.	.	.
Template Sequence		L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	.	H	K	K	K	V	L	V	V	S	A	D	V	.	.	.	.	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	.	.	.	.	.	P	S	D	V	G	Q	K	P	V	D	I	V	N
Template Known Secondary structure						S	S	S	S	S	S	T	T	T										T	S	.	S	S					B						.	.	.	.	S	S	S		S											T	T					.	.	.	.	.			S	S				T	T
Template Predicted Secondary structure																										.													.	.	.	.																						.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	R	Y	Q	A	F	A	R	T	L	L	P	G	E	V	L	V	T	A	Q	H	L	D	D	Q	C	E	T	F	L	L	A	L	K	R
Query Conservation
Alig confidence			.	.	.
Template Conservation			.	.	.
Template Sequence		A	.	.	.	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K
Template Known Secondary structure			.	.	.								T	T		S											S	S
Template Predicted Secondary structure			.	.	.
Template SS confidence
		174				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions