Job Description P52097 Confidence 31.08% Date Thu Jan 5 12:05:18 GMT 2012 Rank 160 Aligned Residues 85 % Identity 15% Template c2iy3A_ PDB info PDB header:rna-binding Chain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome Resolution 16.00 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	V	A	F	S	G	G	L	D	S	T	V	L	L	H	Q	L	V	Q	W	R	T	E	N	P	G	V	A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	Q	V	P	L	V	V	E	R	V	Q	L	A	Q	E	G	L	G	I	E	A	Q	A	R
Query Conservation
Alig confidence																										.	.												.	.	.	.																						.	.	.	.	.
Template Conservation																										.	.												.	.	.	.																						.	.	.	.	.
Template Sequence		F	L	V	G	L	Q	G	S	G	K	T	T	T	A	A	K	L	A	L	Y	Y	K	G	K	.	.	G	R	R	P	L	L	V	A	A	D	T	.	.	.	.	Q	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	.	.	.	.	.	E	V	M	D	G	E	S	P	E	S	I	R	R
Template Known Secondary structure							T	T	S	S															T	.	.	T										S	.	.	.	.	S																T					.	.	.	.	.				T	T
Template Predicted Secondary structure																										.	.												.	.	.	.																						.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	R	Y	Q	A	F	A	R	T	L	L	P	G	E	V	L	V	T
Query Conservation
Alig confidence			.	.	.
Template Conservation			.	.	.
Template Sequence		R	.	.	.	V	E	E	K	A	R	L	E	A	R	D	L	I	L	V
Template Known Secondary structure			.	.	.									T		S
Template Predicted Secondary structure			.	.	.
Template SS confidence
		171				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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