Job Description P52097 Confidence 100.00% Date Thu Jan 5 12:05:18 GMT 2012 Rank 3 Aligned Residues 298 % Identity 24% Template c2e21A_ PDB info PDB header:ligase Chain: A: PDB Molecule:trna(ile)-lysidine synthase; PDBTitle: crystal structure of tils in a complex with amppnp from aquifex2 aeolicus. Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	T	L	N	R	Q	L	L	T	S	R	Q	I	L	V	A	F	S	G	G	L	D	S	T	V	L	L	H	Q	L	V	Q	W	R	T	E	N	P	G	V	A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	Q	V	P	L	V	V	E	R	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	N	D	E	K	I	F	S	G	E	R	R	V	L	I	A	F	S	G	G	V	D	S	V	V	L	T	D	V	L	L	K	L	K	N	Y	F	S	L	K	E	V	A	L	A	H	F	N	H	M	L	R	E	S	A	E	R	D	E	E	F	C	K	E	F	A	K	E	R	N	M	K	I	F	V	G	K	E	D
Template Known Secondary structure								S		S	S										S	S														T	T	T	T	T		S										S		S	S	T															T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		82	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																									.	.
Query SS confidence				.	.	.	.																									.	.
Query Sequence		L	A	.	.	.	.	Q	E	G	L	G	I	E	A	Q	A	R	Q	A	R	Y	Q	A	F	A	R	T	L	L	P	.	.	G	E	V	L	V	T	A	Q	H	L	D	D	Q	C	E	T	F	L	L	A	L	K	R	G	S	G	P	A	G	L	S	A	M	A	E	V	S	E	F	A	G	T	R	L	I	R	P	L
Query Conservation				.	.	.	.																									.	.
Alig confidence				.	.	.	.																									.	.																																								.	.	.	.
Template Conservation																																																																									.	.	.	.
Template Sequence		V	R	A	F	A	K	E	N	R	M	S	L	E	E	A	G	R	F	L	R	Y	K	F	L	K	E	I	L	E	S	E	G	F	D	C	I	A	T	A	H	H	L	N	D	L	L	E	T	S	L	L	F	F	T	R	G	T	G	L	D	G	L	I	G	F	L	P	K	E	E	V	.	.	.	.	I	R	R	P	L
Template Known Secondary structure						T	T	T	T	S																							T		S																					T										S		S			T	T	.	.	.	.				T	T
Template Predicted Secondary structure																																																																									.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	T	R	G	E	L	V	Q	W	A	R	Q	Y	D	L	R	W	I	E	D	E	S	N	Q	D	D	S	Y	D	R	N	F	L	R	L	R	V	V	P	L	L	Q	Q	R	W	P	H	F	A	E	A	T	A	R	S	A	A	L	C	A	E	Q	E	S	L	L	D	E	L	L	A	D	D	L	A	H	C	Q
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		Y	Y	V	K	R	S	E	I	E	E	Y	A	K	F	K	G	L	R	W	V	E	D	E	T	N	Y	E	V	S	I	P	R	N	R	I	R	H	R	V	I	P	E	L	K	R	I	N	E	N	L	E	D	T	F	L	K	M	V	K	V	L	R	A	E	R	E	F	L	E	E	E	A	Q	K	L	Y	K	E	V	.
Template Known Secondary structure		T	T													T	T								G	G	G		T	T	S									T									T	T																															.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	Q	G	T	L	Q	I	V	P	M	L	A	M	S	D	A	R	R	A	A	I	I	R	R	W	L	A	G	Q	N	A	P	M	P	S	R	D	A	L	V	R	I	W	Q	E	V	A	L	A	R	E	D	A	S	P	C	L	R	L	G	A	F	E	I	R	R	Y	Q	S	Q	L	W	W	I	K	S	V
Query Conservation
Alig confidence																													.	.	.	.	.																.	.	.																			.
Template Conservation																													.	.	.	.	.																.	.	.																			.
Template Sequence		K	K	G	N	C	L	D	V	K	K	L	K	E	K	P	L	A	L	Q	R	R	V	I	R	K	F	I	.	.	.	.	.	G	E	K	D	Y	E	K	V	E	L	V	R	S	L	L	.	.	.	E	K	G	G	E	V	N	L	G	K	G	K	V	L	K	R	K	E	.	R	W	L	C	F	S	P	E	V
Template Known Secondary structure				T	T								T	T	S														.	.	.	.	.	T												G	G	G	.	.	.	T	S		S					S	S	S							T	.	T
Template Predicted Secondary structure																													.	.	.	.	.																.	.	.																			.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.						.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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