Job Description P52097 Confidence 99.85% Date Thu Jan 5 12:05:18 GMT 2012 Rank 13 Aligned Residues 185 % Identity 13% Template c2dplA_ PDB info PDB header:ligase Chain: A: PDB Molecule:gmp synthase [glutamine-hydrolyzing] subunit b; PDBTitle: crystal structure of the gmp synthase from pyrococcus horikoshii ot3 Resolution 1.43 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	T	L	N	R	Q	L	L	T	S	R	Q	I	L	V	A	F	S	G	G	L	D	S	T	V	L	L	H	Q	L	V	Q	W	R	T	E	N	P	G	V	A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	Q	V	P	L	V	V	E	R	V	Q
Query Conservation
Alig confidence																																				.	.	.	.																		.
Template Conservation																																				.	.	.	.																		.
Template Sequence		K	V	R	E	I	R	E	T	V	G	D	S	K	A	I	I	A	L	S	G	G	V	D	S	S	T	A	A	V	L	A	H	K	A	.	.	.	.	I	G	D	R	L	H	A	V	F	V	N	T	G	F	L	R	K	.	G	E	P	E	F	V	V	K	T	F	R	D	E	F	G	M	N	L	H	Y	V	D	A	Q
Template Known Secondary structure											T	T	S								S	S														.	.	.	.		G	G	G									S				T	.	T										T	T	T	T
Template Predicted Secondary structure																																				.	.	.	.																		.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
										82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.											.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																											.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																											.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	L	A	Q	E	G	L	G	I	E	A	Q	A	R	Q	A	R	Y	Q	A	F	A	R	T	L	L	P	.	.	G	E	V	L	V	T	A	Q	H	L	D	D	Q	C	E	T	F	.	.	.	.	.	.	.	.	.	.	L	L	A	L	K	R	G	S	G	P	A	G	L	S	A	M	A
Query Conservation		.	.	.	.	.	.	.	.																											.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																											.	.																		.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																																																													.	.
Template Sequence		D	R	F	F	S	A	L	K	G	V	T	D	P	E	E	K	R	K	I	I	G	R	V	F	I	E	V	F	E	E	V	A	K	K	I	G	A	E	Y	L	I	Q	G	T	I	A	P	L	N	L	K	L	I	E	P	L	R	D	L	Y	K	D	E	V	R	E	L	A	K	F	L	G	L	P	E	.	.	K	I	Y
Template Known Secondary structure								T	T	T																											T		S																	T	T	T	T													T	T				.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.
		142	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		E	V	S	E	F	.	A	G	T	R	L	I	R	P	L	L	A	R	T	R	G	E	L	V	Q	W	A	R	Q	Y	D	L	R	W	I	E	D	E	S	N	Q	D	D	S	Y	D	R	N	F	L	R	L	R	V	V	P
Query Conservation							.
Alig confidence							.																											.	.	.
Template Conservation																																		.	.	.
Template Sequence		N	R	M	P	F	P	G	P	G	L	A	V	R	V	I	G	E	V	T	P	E	K	I	R	I	V	R	E	A	N	A	I	.	.	.	V	E	E	E	V	E	R	A	G	L	R	P	W	Q	A	F	A	V	L	L	G
Template Known Secondary structure		T						T	T	G	G	G	G	G	B	S	S	S																.	.	.								T	T				S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions