Job Description P52097 Confidence 99.83% Date Thu Jan 5 12:05:18 GMT 2012 Rank 17 Aligned Residues 171 % Identity 21% Template c2c5sA_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:probable thiamine biosynthesis protein thii; PDBTitle: crystal structure of bacillus anthracis thii, a trna-2 modifying enzyme containing the predicted rna-binding3 thump domain Resolution 2.5 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																	.	.	.	.	.											.	.
Query SS confidence																																																																	.	.	.	.	.											.	.
Query Sequence		L	L	T	S	R	Q	I	L	V	A	F	S	G	G	L	D	S	T	V	L	L	H	Q	L	V	Q	W	R	T	E	N	P	G	V	A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	.	.	.	.	.	Q	V	P	L	V	V	E	R	V	Q	.	.
Query Conservation																																																																	.	.	.	.	.											.	.
Alig confidence																												.	.	.	.	.																	.																.	.	.	.	.											.	.
Template Conservation																												.	.	.	.	.																	.
Template Sequence		V	G	V	G	G	K	V	M	V	L	L	S	G	G	I	D	S	P	V	A	A	Y	L	T	M	K	.	.	.	.	.	R	G	V	S	V	E	A	V	H	F	H	S	P	P	F	T	.	S	E	R	A	K	Q	K	V	I	D	L	A	Q	E	L	T	K	Y	C	K	R	V	T	L	H	L	V	P	F	T	E	V
Template Known Secondary structure		T	T	T	T									S	S	S												.	.	.	.	.	B	T											T	T	T	S	.																G	G	G	S	S
Template Predicted Secondary structure																												.	.	.	.	.																	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.						200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
							82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																											.	.
Query SS confidence		.	.	.	.	.																											.	.
Query Sequence		.	.	.	.	.	L	A	Q	E	G	L	G	I	E	A	Q	A	R	Q	A	R	Y	Q	A	F	A	R	T	L	L	P	.	.	G	E	V	L	V	T	A	Q	H	L	D	D	Q	C	E	T	F	L	L	A	L	K	R	G	S	G	P	A	G	L	S	A	M	A	E	V	S	E	F	A	G	T	R	L	I	R	P
Query Conservation		.	.	.	.	.																											.	.
Alig confidence		.	.	.	.	.																											.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	T	I	N	K	E	I	P	S	S	Y	S	M	T	V	M	R	R	M	M	M	R	I	T	E	R	I	A	E	E	R	N	A	L	A	I	T	T	G	E	S	L	G	Q	V	A	S	Q	T	L	D	S	.	.	.	.	.	.	.	.	.	.	.	.	M	H	T	I	N	E	V	T	N	Y	P	V	I	R	P
Template Known Secondary structure									S		G	G	G																				T	T										S	S	S	T	T	S						.	.	.	.	.	.	.	.	.	.	.	.					G	G	G			S					T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300													.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																						.	.	.	.	.
Query SS confidence																																						.	.	.	.	.
Query Sequence		L	L	A	R	T	R	G	E	L	V	Q	W	A	R	Q	Y	D	L	R	W	I	E	D	E	S	N	Q	D	D	S	Y	D	R	N	F	L	.	.	.	.	.	R	L	R	V	V	P	L	L	Q	Q
Query Conservation																																						.	.	.	.	.
Alig confidence																				.	.	.																.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		L	I	T	M	D	K	L	E	I	I	K	I	A	E	E	I	G	T	.	.	.	Y	D	I	S	I	R	P	Y	K	P	K	R	E	K	A	N	R	F	E	A	K	Y	D	F	T	P	L	I	D	E
Template Known Secondary structure		T	T	T													T	T		.	.	.					T	S														T	T	S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.				.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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