Job Description P52097 Confidence 99.94% Date Thu Jan 5 12:05:18 GMT 2012 Rank 7 Aligned Residues 160 % Identity 18% Template c1vl2C_ PDB info PDB header:ligase Chain: C: PDB Molecule:argininosuccinate synthase; PDBTitle: crystal structure of argininosuccinate synthase (tm1780) from2 thermotoga maritima at 1.65 a resolution Resolution 1.65 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	Q	I	L	V	A	F	S	G	G	L	D	S	T	V	L	L	H	Q	L	V	Q	W	R	T	E	N	P	G	V	A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	Q	V	P	L	V	V	E	R	V	Q	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																													.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.																													.	.	.
Template Sequence		K	E	K	V	V	L	A	Y	S	G	G	L	D	T	S	V	I	L	K	W	L	C	E	.	.	.	.	.	K	G	F	D	V	I	A	Y	V	A	N	V	G	Q	K	D	D	F	V	A	I	K	E	K	A	L	K	T	.	.	.	G	A	S	K	V	Y	V	E	D	L	R	R	E	F	V	T	D	Y	I	F	T
Template Known Secondary structure											S	S													.	.	.	.	.	T	T										S	S																.	.	.	T		S															T
Template Predicted Secondary structure																									.	.	.	.	.																													.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
									82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																											.	.
Query SS confidence		.	.	.	.	.	.	.																											.	.
Query Sequence		.	.	.	.	.	.	.	L	A	Q	E	G	L	G	I	E	A	Q	A	R	Q	A	R	Y	Q	A	F	A	R	T	L	L	P	.	.	G	E	V	L	V	T	A	Q	H	L	D	D	Q	C	E	T	F	L	L	A	L	K	R	G	S	G	P	A	G	L	S	A	M	A	E	V	S	E	F	A	G	T	R	L	I
Query Conservation		.	.	.	.	.	.	.																											.	.
Alig confidence		.	.	.	.	.	.	.																											.	.																											.												.	.	.	.	.	.	.
Template Conservation																																																															.												.	.	.	.	.	.	.
Template Sequence		A	L	L	G	N	A	M	Y	E	G	R	Y	L	L	G	T	A	I	A	R	P	L	I	A	K	R	Q	V	E	I	A	E	K	E	G	A	Q	Y	V	A	H	G	A	T	G	K	G	N	D	Q	V	R	F	E	L	T	Y	A	A	L	N	.	P	N	L	K	V	I	S	P	W	K	D	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	T			B	T	T	T	B																							T		S								T	T	S	S														.	T	T	S					G	G	G		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.												.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	L	L	A	R	T	R	G	E	L	V	Q	W	A	R	Q	Y	D	L	R	W	I	E	D	E	S	N	Q	D	D	S	Y	D	R	N
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		P	E	F	L	A	K	F	K	T	D	L	I	N	Y	A	M	E	K	G	I	P	I	K	V	S	K	K	R	.	P	Y	S	E	D	E	N
Template Known Secondary structure								T												T					S	S				.	S	S
Template Predicted Secondary structure																														.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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