Job Description P52097 Confidence 98.88% Date Thu Jan 5 12:05:18 GMT 2012 Rank 45 Aligned Residues 128 % Identity 9% Template c1vbkA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph1313; PDBTitle: crystal structure of ph1313 from pyrococcus horikoshii ot3 Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		L	L	T	S	R	Q	I	L	V	A	F	S	G	G	L	D	S	T	V	L	L	H	Q	L	V	Q	W	R	T	E	N	P	G	V	A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	.	.	Q	V	P	L	V	V	E	R	V	Q	L	A	Q	E	G
Query Conservation																																																																	.	.
Alig confidence																	.											.	.	.	.	.														.	.																		.	.												.	.	.	.
Template Conservation																	.											.	.	.	.	.														.	.																															.	.	.	.
Template Sequence		I	G	T	E	G	R	M	I	G	I	L	H	D	E	L	.	S	A	L	A	I	F	L	M	M	K	.	.	.	.	.	R	G	V	E	V	I	P	V	Y	I	G	K	D	.	.	D	K	N	L	E	K	V	R	S	L	W	N	L	L	K	R	Y	S	Y	G	S	K	G	F	L	V	V	A	E	S	.	.	.	.
Template Known Secondary structure		T	T	T	T								S	S			.											.	.	.	.	.	B	T									S		S	.	.	S															T	T		T	T	S								S	S	.	.	.	.
Template Predicted Secondary structure																	.											.	.	.	.	.														.	.																															.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		L	G	I	E	A	Q	A	R	Q	A	R	Y	Q	A	F	A	R	T	L	L	P	.	.	G	E	V	L	V	T	A	Q	H	L	D	D	Q	C	E	T	F	L	L	A	L	K	R	G	S	G	P	A	G	L	S	A	M	A	E	V	S	E	F	A	G	T	R	L	I	R	P	L	L	A	R	T	R	G	E	L	V
Query Conservation																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.											.	.															.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	F	D	R	V	L	K	L	I	R	D	F	G	V	K	G	V	I	K	G	L	R	P	N	D	L	N	.	.	.	.	.	.	.	.	.	.	.	.	S	E	V	S	E	I	T	E	D	F	.	K	M	F	P	V	P	V	Y	Y	P	L	I	A	L	P	E	E	Y	I	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.												T										G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	T	T									.				S	S									S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
													244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.													270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	W	A	R	Q	Y	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	K	E	R	L	G	L
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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