Job Description P52097 Confidence 100.00% Date Thu Jan 5 12:05:18 GMT 2012 Rank 1 Aligned Residues 431 % Identity 99% Template c1ni5A_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:putative cell cycle protein mesj; PDBTitle: structure of the mesj pp-atpase from escherichia coli Resolution 2.65 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	T	L	N	R	Q	L	L	T	S	R	Q	I	L	V	A	F	S	G	G	L	D	S	T	V	L	L	H	Q	L	V	Q	W	R	T	E	N	P	G	V	A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	Q	V	P	L	V	V	E	R	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	T	L	N	R	Q	L	L	T	S	R	Q	I	L	V	A	F	S	G	G	L	D	S	T	V	L	L	H	Q	L	V	Q	W	R	T	E	N	P	G	V	A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	Q	V	P	L	V	V	E	R	V	Q
Template Known Secondary structure										T	T		S								S	B															T	T	S	T	T											S			S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	E	G	L	G	I	E	A	Q	A	R	Q	A	R	Y	Q	A	F	A	R	T	L	L	P	G	E	V	L	V	T	A	Q	H	L	D	D	Q	C	E	T	F	L	L	A	L	K	R	G	S	G	P	A	G	L	S	A	M	A	E	V	S	E	F	A	G	T	R	L	I	R	P	L	L	A	R	T	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	Q	E	G	L	G	I	E	A	Q	A	R	Q	A	R	Y	Q	A	F	A	R	T	L	L	P	G	E	V	L	V	T	A	Q	H	L	D	D	Q	C	E	T	F	L	L	A	L	K	R	G	S	G	P	A	G	L	S	A	X	A	E	V	S	E	F	A	G	T	R	L	I	R	P	L	L	A	R	T	R	G
Template Known Secondary structure					S	S	S	T	T	T	T													T			T	T																					T	T	T			T	T	G	G	G				S					T	T						G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	Q	W	A	R	Q	Y	D	L	R	W	I	E	D	E	S	N	Q	D	D	S	Y	D	R	N	F	L	R	L	R	V	V	P	L	L	Q	Q	R	W	P	H	F	A	E	A	T	A	R	S	A	A	L	C	A	E	Q	E	S	L	L	D	E	L	L	A	D	D	L	A	H	C	Q	S	P	Q	G	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	V	Q	W	A	R	Q	Y	D	L	R	W	I	E	D	E	S	N	Q	D	D	S	Y	D	R	N	F	L	R	L	R	V	V	P	L	L	Q	Q	R	W	P	H	F	A	E	A	T	A	R	S	A	A	L	C	A	E	Q	E	S	L	L	D	E	L	L	A	D	D	L	A	H	C	Q	S	P	Q	G	T	L
Template Known Secondary structure										T	T				B					G	G	G	T	T	S								T										T	T																															B		S	S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	V	P	M	L	A	M	S	D	A	R	R	A	A	I	I	R	R	W	L	A	G	Q	N	A	P	M	P	S	R	D	A	L	V	R	I	W	Q	E	V	A	L	A	R	E	D	A	S	P	C	L	R	L	G	A	F	E	I	R	R	Y	Q	S	Q	L	W	W	I	K	S	V	T	G	Q	S	E	N	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	V	P	X	L	A	X	S	D	A	R	R	A	A	I	I	R	R	W	L	A	G	Q	N	A	P	X	P	S	R	D	A	L	V	R	I	W	Q	E	V	A	L	A	R	E	D	A	S	P	C	L	R	L	G	A	F	E	I	R	R	Y	Q	S	Q	L	W	W	I	K	S	V	T	G	Q	S	E	N	I	V
Template Known Secondary structure			S	G	G	G	T	T	S																T	T																T	T	T	S		G	G	G							T	T						S	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	W	Q	T	W	L	Q	P	L	E	L	P	A	G	L	G	S	V	Q	L	N	A	G	G	D	I	R	P	P	R	A	D	E	A	V	S	V	R	F	K	A	P	G	L	L	H	I	V	G	R	N	G	G	R	K	L	K	K	I	W	Q	E	L	G	V	P	P	W	L	R	D	T	T	P	L	L	F	Y	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	W	Q	T	W	L	Q	P	L	E	L	P	A	G	L	G	S	V	Q	L	N	A	G	G	D	I	R	P	P	R	A	D	E	A	V	S	V	R	F	K	A	P	G	L	L	H	I	V	G	R	N	G	G	R	K	L	K	K	I	W	Q	E	L	G	V	P	P	W	L	R	D	T	T	P	L	L	F	Y	G	E
Template Known Secondary structure				T	T	T	T	S					S	T	T																	T	T	S						S				S				B	T	T		S	S												T			G	G	G	T	T	S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	I	A	A	A	G	V	F	V	T	Q	E	G	V	A	E	G	E	N	G	V	S	F	V	W	Q	K	T	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	I	A	A	A	G	V	F	V	T	Q	E	G	V	A	E	G	E	N	G	V	S	F	V	W	Q	K	T	L	S
Template Known Secondary structure							T	T	T			B	G	G	G	B		S	S	S
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.