Job Description P52097 Confidence 99.90% Date Thu Jan 5 12:05:18 GMT 2012 Rank 11 Aligned Residues 149 % Identity 19% Template c1kh2D_ PDB info PDB header:ligase Chain: D: PDB Molecule:argininosuccinate synthetase; PDBTitle: crystal structure of thermus thermophilus hb82 argininosuccinate synthetase in complex with atp Resolution 2.30 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80
Predicted Secondary structure																																																													.									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	L	V	A	F	S	G	G	L	D	S	T	V	L	L	H	Q	L	V	Q	W	R	T	E	N	P	G	V	A	L	R	A	I	H	V	H	H	G	L	S	A	N	A	D	A	W	V	T	H	C	E	N	V	C	Q	Q	W	Q	.	V	P	L	V	V	E	R	V	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.																			.	.	.	.												.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.																			.	.	.	.
Template Sequence		K	I	V	L	A	Y	S	G	G	L	D	T	S	I	I	L	K	W	L	K	E	T	.	.	.	.	Y	R	A	E	V	I	A	F	T	A	D	I	G	Q	G	E	E	V	.	.	.	.	E	E	A	R	E	K	A	L	R	T	G	A	S	K	A	I	A	L	D	L	K	E	E	F	V	R	D	F	V	F	P	M
Template Known Secondary structure									S	S														.	.	.	.												S	S	S	S				.	.	.	.											T		S															T
Template Predicted Secondary structure																								.	.	.	.																			.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
							81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.	.	.																												.	.											.	.
Query SS confidence		.	.	.	.	.																												.	.											.	.
Query Sequence		.	.	.	.	.	Q	L	A	Q	E	G	L	G	I	E	A	Q	A	R	Q	A	R	Y	Q	A	F	A	R	T	L	L	P	.	.	G	E	V	L	V	T	A	Q	H	L	.	.	D	D	Q	C	E	T	F	L	L	A	L	K	R	G	S	G	P	A	G	L	S	A	M	A	E	V	S	E	F	A	G	T	R	L
Query Conservation		.	.	.	.	.																												.	.											.	.
Alig confidence		.	.	.	.	.																												.	.											.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	A	G	A	V	Y	E	G	Y	Y	L	L	G	T	S	I	A	R	P	L	I	A	K	H	L	V	R	I	A	E	E	E	G	A	E	A	I	A	H	G	A	T	G	K	G	N	D	Q	V	R	F	E	L	T	A	Y	A	L	K	P	D	I	K	V	I	A	P	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T			B	T	T	T	B			T	T	T	T																	T		S								T	T	S	S														T	T							.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	P	L	L	A	R	T	R	G	E	L	V	Q	W	A	R	Q	Y	D	L	R	W	I	E	D	E	S	N	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	R	E	W	S	F	Q	G	R	K	E	M	I	A	Y	A	E	A	H	G	I	P	V	P	P	Y	S	M	D	A	N
Template Known Secondary structure									S											T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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