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Job DescriptionP52097
Confidence99.48%DateThu Jan 5 12:05:18 GMT 2012
Rank38Aligned Residues133
% Identity18%Templatec1gpmD_
PDB info PDB header:transferase (glutamine amidotransferase)Chain: D: PDB Molecule:gmp synthetase; PDBTitle: escherichia coli gmp synthetase complexed with amp and pyrophosphate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQ. . . . . . . . . L
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Template Sequence  DDKVILGLSGGVDSSVTAMLLHRA. . . . IGKNLTCVFVDNGLLR. LNEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAGE
Template Known Secondary structure  T


SS....GGG
S
S
.TTTTT


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   227..230.........240.........250 .........260...... ...270.........280.........290.........300.
 
   83......90.........100......... 110.........120.........130.........140.........150.........160
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Query Sequence  AQEGLGIEAQARQARYQAFARTLLPGE. . VLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTR
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Template Sequence  NDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIEM. . . . . . . . . . . . . . . . . . . . . . . . KMGLVEPLKELFK
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   302.......310.........320.........330.........340.... .....350.......
 
   161........170...
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Query Sequence  GELVQWARQYDLR
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Template Sequence  DEVRKIGLELGLP
Template Known Secondary structure  TT

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   382.......390....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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