 |
Job Description | P08401 | Confidence | 98.29% | Date | Thu Jan 5 11:01:29 GMT 2012 |
Rank | 42 | Aligned Residues | 96 |
% Identity | 22% | Template | d1ei1a2 |
SCOP info | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
| DNA gyrase/MutL, N-terminal domain
|
Resolution | 2.30 |
|
 |
  |   |
368 | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 420 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
430 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
Query Sequence |   |
L | E | Q | A | L | G | N | L | L | D | N | A | I | D | F | T | P | E | S | G | C | I | T | L | S | A | E | V | D | Q | E | H | V | T | L | K | V | L | D | T | G | S | G | I | P | D | Y | A | L | S | . |
. |
. |
. |
. |
. |
. |
. |
R | I | F | E | R | F | Y | S | L | P | R | A | . |
. |
. |
. |
. |
. |
N | G | Q | K |
Query Conservation |   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |
|
|   |   |
|   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |
|   | . |
|   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
L | H | H | M | V | F | E | V | V | D | N | A | I | D | E | A | L | A | G | H | C | K | E | I | I | V | T | I | H | A | D | N | S | . |
V | S | V | Q | D | D | G | R | G | I | P | T | G | I | H | P | E | E | G | V | S | A | A | E | V | I | M | T | V | L | H | A | G | G | K | F | D | D | N | S | Y | K | V | S | G | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |
| T | T | S |
| . |  |  |  |  |  |
| S | S |
|
|
|
| S | B |
| T | T | T | S | S | B |  |  |  |  |  |  |  | S | T | T |
| S | S |
| S | S | S | S | S |
| S | S |
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
  |
  |   |
434 | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | S | G | L | G | L | A | F | V | S | E | V | A | R | L | F | N | G | E | V | T | L | R | N | V | Q | E | G | G | V | L | A | S | L | R | L |
Query Conservation |   |
|   |
|
|
|
|   |
|   |
|   |
|
|   |   |
|
|
|   |
|   |
|   |
|   |   |   |   |
|
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|   |   |
|   |   |   |
|   | . | . | . | . |   |   |   |
|   |   |   |   |   | . |
|   |   |   |   |   |   |   |
Template Sequence |   |
L | H | G | V | G | V | S | V | V | N | A | L | S | Q | . |
. |
. |
. |
K | L | E | L | V | I | Q | R | E | . |
G | K | I | H | R | Q | I | Y |
Template Known Secondary structure |   |
| S | S |
|  |  |  |  |  |  |  | T |  |  | . | . | . | . |  |  |  |  |  |  |  |  | T | . | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
|
|
. | 130 | . | . | . | . | . | . | . | |
. | . | 140 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|