 |
| Job Description | P08401 | | Confidence | 20.74% | Date | Thu Jan 5 11:01:29 GMT 2012 |
| Rank | 104 | Aligned Residues | 68 |
| % Identity | 12% | Template | c3oyyA_ |
| PDB info |
PDB header:translation | Chain: A: PDB Molecule:elongation factor p; |
PDBTitle: structure of pseudomonas aeruginosa elongation factor p
|
| Resolution | 1.75 Å |
|
| | |
343 | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | |
|
. | . | . | . | . | 380 | . | . | . | . | . | . | . | . | |
|
. | 390 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . |
| Predicted Secondary structure | |
 | | | | |
|
|
|
|
|
|
|
|
|
|
|  | | | | |  | | | | | | | | | | | . | . | | | | | | | | |
|
|
|
|
| | . | . | | | | | | | . | . | . | . | . | . | . | | |
|
| | | | | | | | |
|
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
V | Q | L | A | E | K | K | I | T | L | H | V | T | P | T | E | V | N | V | A | A | E | P | A | L | L | E | Q | A | L | G | N | . |
. |
L | L | D | N | A | I | D | F | T | P | E | S | G | C | . |
. |
I | T | L | S | A | E | . |
. |
. |
. |
. |
. |
. |
V | D | Q | E | H | V | T | L | K | V | L | D | T | G | S | G | I |
| Query Conservation | |
| | | | | | |
| | | | | | | | | | |
| | |
| | | |
| | |
|
| |
| . | . |
|
| |
|
|
|
| | | | | | | | . | . |
| |
| | | | . | . | . | . | . | . | . | | | | | | | |
| |
| |
| |
| |
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
|
| | | | |
|
|
|
| |
|
|
| | |
|
|
|
| |
| . |
|
|
|
| |
| | | | | | | | | | | |
| |
|
| | | | |
| | | | | | | | | |
| |
| |
|
| | |
| |
| |
| |
|
| |
| | |
| Template Sequence | |
I | I | L | D | R | K | E | V | T | Y | S | Y | F | A | D | P | L | Y | V | F | M | D | S | E | . |
F | N | Q | Y | E | I | E | K | D | D | L | E | G | V | L | T | F | I | E | D | G | M | T | D | I | C | E | A | V | F | Y | N | D | K | V | I | S | V | E | L | P | T | T | I | V | R | Q | I | A | Y | T | E | P | A | V |
| Template Known Secondary structure | |
|
|
| | | | | | | | | | |
| S | S | S | | | | | | T | T | . |
|
| | | | |
| G | G | G |
| T | T | T | G | G | G |
|
| T | T |
|
|
|
| | | | | | | T | T | | | | | | |
|
| S | | | | | | | | | |
|
|
|
|
| Template Predicted Secondary structure | |
| | | | | | | | | | | | |
|
|
| | | | | |
|
|
| . |
|
| | | | |
| | | | | | | | | | |
|
|
|
|
| | | | | | | | | |
|
| | | | | | |
|
|
| | | | | | | | |
|
|
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
