Job Description P08401 Confidence 99.02% Date Thu Jan 5 11:01:29 GMT 2012 Rank 35 Aligned Residues 86 % Identity 24% Template c3na3A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:dna mismatch repair protein mlh1; PDBTitle: mutl protein homolog 1 isoform 1 from homo sapiens Resolution 2.50 Å

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		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	Q	A	L	G	N	L	L	D	N	A	I	D	F	T	P	E	S	G	C	I	T	L	S	A	E	V	D	Q	E	H	V	T	L	K	V	L	D	T	G	S	G	I	P	D	Y	A	L	S	R	I	F	E	R	F	Y	S	L	P	R	A	N	G	Q	K	S	S	G	L	G	L	A	F	V	S	E	V	A	R
Query Conservation
Alig confidence																			.	.								.																																		.																		.	.
Template Conservation																			.	.								.																																		.																		.	.
Template Sequence		P	A	N	A	I	K	E	M	I	E	N	C	L	D	A	K	S	.	.	T	S	I	Q	V	I	V	.	K	E	G	G	L	K	L	I	Q	I	Q	D	N	G	T	G	I	R	K	E	D	L	D	I	V	C	E	R	F	T	T	S	K	.	L	Q	S	F	G	F	R	G	E	A	L	A	S	I	S	H	V	.	.
Template Known Secondary structure																T	T		.	.	S							.		G	G	G	T	S								S					G	G	G	G	G	T	T	T	S	T	T			S	S	.							T	T									S	.	.
Template Predicted Secondary structure																			.	.								.																																		.																		.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	N	G	E	V	T	L	R	N	V	Q	E	G	G
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	A	H	V	T	I	T	T	K	T	A	D	G
Template Known Secondary structure		.	.	.	S									T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					111	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions