Job Description P08401 Confidence 98.67% Date Thu Jan 5 11:01:29 GMT 2012 Rank 37 Aligned Residues 94 % Identity 17% Template c3h4lB_ PDB info PDB header:dna binding protein, protein binding Chain: B: PDB Molecule:dna mismatch repair protein pms1; PDBTitle: crystal structure of n terminal domain of a dna repair protein Resolution 2.50 Å

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		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.								.	.	430	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.									.
Query SS confidence																																																														.	.	.	.	.	.	.									.
Query Sequence		L	E	Q	A	L	G	N	L	L	D	N	A	I	D	F	T	P	E	S	G	C	I	T	L	S	A	E	V	D	Q	E	H	V	T	L	K	V	L	D	T	G	S	G	I	P	D	Y	A	L	S	R	I	F	E	R	F	Y	S	L	P	.	.	.	.	.	.	.	R	A	N	G	Q	K	S	S	.	G	L	G	L
Query Conservation																																																														.	.	.	.	.	.	.									.
Alig confidence																			.	.														.																												.	.	.	.	.	.	.									.
Template Conservation																			.	.														.
Template Sequence		L	T	T	A	V	K	E	L	V	D	N	S	I	D	A	N	A	.	.	N	Q	I	E	I	I	F	K	D	Y	G	L	E	.	S	I	E	C	S	D	N	G	D	G	I	D	P	S	N	Y	E	F	L	A	L	K	H	Y	T	S	K	I	A	K	F	Q	D	V	A	K	V	Q	T	L	G	F	R	G	E	A	L
Template Known Secondary structure																T	T		.	.	S								G	G	G	T	S	.								S					T	T	T	G	G	G	S	S									T	T	S	S						T	T	S	S			S	S
Template Predicted Secondary structure																			.	.														.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	V	S	E	V	A	R	L	F	N	G	E	V	T	L	R	N	V	Q	E	G	G	V	L	A	S	L	R	L
Query Conservation
Alig confidence								.	.	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		S	S	L	C	G	I	.	.	.	.	.	A	K	L	S	V	I	T	T	T	S	P	P	K	A	D	K	L	E	Y
Template Known Secondary structure							S	.	.	.	.	.	S								S	S	T	T
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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