Job Description P08401 Confidence 46.40% Date Thu Jan 5 11:01:29 GMT 2012 Rank 81 Aligned Residues 146 % Identity 15% Template c3by9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the v. cholerae histidine kinase dctb2 sensor domain Resolution 1.70 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		K	E	V	K	P	G	V	R	R	A	T	E	G	T	L	I	D	T	A	T	L	L	A	E	L	A	R	.	.	.	.	.	.	P	D	L	L	S	G	D	P	T	H	G	Q	L	A	Q	A	F	N	Q	L	Q	H	R	P	F	R	A	N	I	G	G	I	N	K	V	R	N	E	Y	H	V	Y	M	T	D	A	Q
Query Conservation																													.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.
Template Conservation
Template Sequence		R	F	Q	Y	Q	A	L	L	N	E	H	Q	S	Q	L	D	R	F	S	S	H	I	V	A	T	L	D	K	Y	A	H	I	P	H	L	I	S	K	D	K	E	L	V	D	A	L	L	S	A	Q	N	S	A	Q	I	D	I	T	N	R	Y	L	E	Q	V	N	E	V	I	Q	A	A	D	T	Y	L	I	D	R	F
Template Known Secondary structure		G	G	G																								T	T	T	T	T							T										T	T	T																				T		S							T	T
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		G	K	V	L	F	D	S	A	N	K	A	.	.	.	.	V	G	Q	D	Y	S	R	W	N	D	V	W	L	T	L	R	G	Q	Y	G	A	R	S	T	L	Q	N	P	A	D	P	E	S	S	V	M	Y	V	A	A	P	I	M	D	G	S	R	L	I	G	V	L	S	V	G	K	P	N	A	A	M	A	P
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.																						.	.
Template Conservation																																						.	.
Template Sequence		G	N	T	I	A	S	S	N	W	N	L	D	R	S	F	I	G	R	N	F	A	W	R	P	Y	F	Y	L	S	I	A	G	Q	K	S	Q	.	.	Y	F	A	L	G	S	T	S	G	Q	R	G	Y	Y	Y	A	Y	P	V	I	Y	A	A	E	I	L	G	V	I	V	V	K	X	D	L	S	A	I	E	Q
Template Known Secondary structure		S	B					T	T	T	T	S	T	T			T	T		B		T	T	S							T	T	T	S				.	.						T	T	T														T	T												S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions