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Job DescriptionP08401
Confidence100.00%DateThu Jan 5 11:01:29 GMT 2012
Rank3Aligned Residues238
% Identity16%Templatec2q8fA_
PDB info PDB header:transferaseChain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 1; PDBTitle: structure of pyruvate dehydrogenase kinase isoform 1
Resolution2.03 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   237..240.........250.........260.........270.........280.. .......290.........300.........310
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Query Sequence  RKLAQALESMRVKLEGKNYIEQYVYALTHELKSPLAAIRGAAEILR. . . . . . EGPPPEVVARFTDNILTQNARMQALVET
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Template Sequence  QSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFDPVTSQNVQYFLDRFYMSRISIRMLLNQ
Template Known Secondary structure  GGGTTS
TT
TTT


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   116...120.........130.........140.........150.........160.........170.........180.........190.....
 
   311........320.........330.........340......... 350.........360.........370.........380..
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Query Sequence  LLRQARLENRQEVVLTAVDVAALFRRVSEARTVQLAEKK. . . . . . . ITLHVTPTEVNVAAEPALLEQALGNLLDNAIDF.
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Template Sequence  HSLLFGHIGSINPNCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRAT
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BTTBS



SSSTTS


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   198.200.........210.........220.........230.........240.........250.........260.........270.......
 
   383......390.........400.........410.........420.........430... ......440........
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Query Sequence  . . . . . . TPESGCITLSAEVDQEHVTLKVLDTGSGIPDYALSRIFERFYSLPRANGQK. . . . . . . . SSGLGLAFVSEVARL
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Template Sequence  MEHHANRGVYPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAPRPRVETSRAVPLAGFGYGLPISRLYAQY
Template Known Secondary structure  STTTT




SS
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GGGG
TTTT





SS

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   289290.........300.........310.........320.........330.........340.........350.........360........
 
   449450.........460.........470....
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Query Sequence  FNGEVTLRNVQEGGVLASLRLHRHFT
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Template Sequence  FQGDLKLYSLEGYGTDAVIYIKALST
Template Known Secondary structure  TT
TTTSSTT
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   369370.........380.........390....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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