Job Description P08401 Confidence 100.00% Date Thu Jan 5 11:01:29 GMT 2012 Rank 5 Aligned Residues 234 % Identity 18% Template c2bu8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands Resolution 2.5 Å

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		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.									.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.
Query Sequence		R	K	L	A	Q	A	L	E	S	M	R	V	K	L	E	G	K	N	Y	I	E	Q	Y	V	Y	A	L	T	H	E	L	K	S	P	L	A	A	I	R	G	A	A	E	I	L	.	.	.	.	.	.	.	.	R	E	G	P	P	P	E	V	V	A	R	F	T	D	N	I	L	T	Q	N	A	R	M	Q	A	L	V
Query Conservation																																															.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	S	L	L	D	I	M	E	F	L	D	K	D	P	E	D	H	R	T	L	S	Q	F	T	D	A	L	V	T	I	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	L	E	Y	K	D	T	Y	G	D	D	P	V	S	N	Q	N	I	Q	Y	F	L	D	R	F	Y	L	S	R	I	S	I	R	M	L	I
Template Known Secondary structure									T	T	S	S			T	T	S	T	T	T	T														T	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.							.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.											350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																			.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	L	L	R	Q	A	R	L	E	N	R	Q	E	V	V	L	.	.	.	.	.	.	T	A	V	D	V	A	A	L	F	R	R	V	S	E	A	R	T	V	Q	L	A	E	K	K	.	.	.	.	.	.	.	.	.	.	I	T	L	H	V	T	P	T	E	V	N	V	A	A	E	P	A	L	L	E	Q	A	L
Query Conservation																			.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Q	H	T	L	I	F	D	G	S	T	N	P	A	H	P	K	H	I	G	S	I	D	P	N	C	N	V	S	E	V	V	K	D	A	Y	D	M	A	K	L	L	C	D	K	Y	Y	M	A	S	P	D	L	E	I	Q	E	I	N	A	A	N	S	K	Q	P	I	H	M	V	Y	V	P	S	H	L	Y	H	M	L
Template Known Secondary structure								T	S	S	S		S	S		S		S		B	T	T	B																										S												S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		373	.	.	.	.	.	.	380	.	.								.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		G	N	L	L	D	N	A	I	D	F	.	.	.	.	.	.	.	T	P	E	S	G	C	I	T	L	S	A	E	V	D	Q	E	H	V	T	L	K	V	L	D	T	G	S	G	I	P	D	Y	A	L	S	R	I	F	E	R	F	Y	S	L	P	R	A	N	G	Q	K	S	S	G	L	G	L	A	F	V	S	E	V
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																																																.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		F	E	L	F	K	N	A	M	R	A	T	V	E	S	H	E	S	S	L	I	L	P	P	I	K	V	M	V	A	L	G	E	E	D	L	S	I	K	M	S	D	R	G	G	G	V	P	L	R	K	I	E	R	L	F	S	Y	M	Y	S	T	P	L	A	.	.	.	.	G	F	G	Y	G	L	P	I	S	R	L	Y
Template Known Secondary structure															T	T	T	T		S													S	S																			G	G	G	G		T	T	T	T					.	.	.	.		S	S
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	L	F	N	G	E	V	T	L	R	N	V	Q	E	G	G	V	L	A	S	L	R	L	H	R	H	F	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	Y	F	Q	G	D	L	Q	L	F	S	M	E	G	F	G	T	D	A	V	I	Y	L	K	A	L	S	T
Template Known Secondary structure					T	T									T	T											S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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