Job Description P08401 Confidence 97.95% Date Thu Jan 5 11:01:29 GMT 2012 Rank 55 Aligned Residues 100 % Identity 20% Template c1qzrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase ii; PDBTitle: crystal structure of the atpase region of saccharomyces cerevisiae2 topoisomerase ii bound to icrf-187 (dexrazoxane) Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.				.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.									.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure																					.	.	.																													.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence																					.	.	.																													.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		L	E	Q	A	L	G	N	L	L	D	N	A	I	D	F	T	P	E	S	.	.	.	G	C	I	T	L	S	A	E	V	D	Q	E	H	V	T	L	K	V	L	D	T	G	S	G	I	P	D	Y	.	.	.	.	.	.	.	.	A	L	S	R	I	F	E	R	F	Y	S	L	P	R	A	N	G	Q	.	.	.	.
Query Conservation																					.	.	.																													.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence																					.	.	.														.	.														.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																																					.	.
Template Sequence		L	F	K	I	F	D	E	I	L	V	N	A	A	D	N	K	V	R	D	P	S	M	K	R	I	D	V	N	I	H	A	E	E	H	T	.	.	I	E	V	K	N	D	G	K	G	I	P	I	E	I	H	N	K	E	N	I	Y	I	P	E	M	I	F	G	H	L	L	T	S	S	N	Y	D	D	D	E	K	K	V
Template Known Secondary structure																					T	T										T	T	T	T		.	.							S	S					S	B		T	T	T		S	B								S	S	S			S				T	T	S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
				433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	K	S	S	G	L	G	L	A	F	V	S	E	V	A	R	L	F	N	G	E	V	T	L	R	N	V	Q	E	G	G	V	L	A	S	L	R	L	H	R	H
Query Conservation		.	.
Alig confidence		.	.																		.	.										.
Template Conservation																					.	.										.
Template Sequence		T	G	G	R	N	G	Y	G	A	K	L	C	N	I	F	S	T	E	F	.	.	I	L	E	T	A	D	L	N	V	.	G	Q	K	Y	V	Q	K	W	E	N	N
Template Known Secondary structure			S			S	S									T					.	.							T	T	T	.	T									T	T
Template Predicted Secondary structure																					.	.										.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions