Job Description P08401 Confidence 100.00% Date Thu Jan 5 11:01:29 GMT 2012 Rank 7 Aligned Residues 252 % Identity 17% Template c1gjvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[3-methyl-2-oxobutanoate dehydrogenase PDBTitle: branched-chain alpha-ketoacid dehydrogenase kinase (bck)2 complxed with atp-gamma-s Resolution 2.7 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.							.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.					.	280	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.																																	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.																																	.	.	.	.
Query Sequence		T	R	Y	A	D	S	V	T	D	N	K	P	V	P	L	P	D	L	G	S	S	E	L	R	K	L	A	Q	A	L	E	S	M	.	.	.	.	.	.	R	V	K	L	E	G	K	N	Y	I	E	Q	Y	V	Y	A	L	T	H	E	L	K	S	P	L	A	A	I	R	G	A	A	.	.	.	.	E	I	L	R	E
Query Conservation																																			.	.	.	.	.	.																																	.	.	.	.
Alig confidence																																			.	.	.	.	.	.																																	.	.	.	.
Template Conservation
Template Sequence		V	R	I	A	H	R	I	K	G	F	R	S	L	P	F	I	I	G	C	N	P	T	I	L	H	V	H	E	L	Y	I	R	A	F	Q	K	L	T	D	F	P	P	I	K	D	Q	A	D	E	A	Q	Y	C	Q	L	V	R	Q	L	L	D	D	H	K	D	V	V	T	L	L	A	E	G	L	R	E	S	R	K	H
Template Known Secondary structure														S						T	S																			T	S					S																		T	T	T													T	T	T
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.		.	.	.	.	.
Predicted Secondary structure																																								.																												.	.	.						.
Query SS confidence																																								.																												.	.	.						.
Query Sequence		G	P	P	P	E	V	V	A	R	F	T	D	N	I	L	T	Q	N	A	R	M	Q	A	L	V	E	T	L	L	R	Q	A	R	L	E	N	R	Q	.	E	V	V	L	T	A	V	D	V	A	A	L	F	R	R	V	S	E	A	R	T	V	Q	L	A	E	K	.	.	.	K	I	T	L	H	.	V	T	P	T	E
Query Conservation																																								.																												.	.	.						.
Alig confidence																																								.																												.	.	.						.
Template Conservation
Template Sequence		I	E	D	E	K	L	V	R	Y	F	L	D	K	T	L	T	S	R	L	G	I	R	M	L	A	T	H	H	L	A	L	H	E	D	K	P	D	F	V	G	I	I	C	T	R	L	S	P	K	K	I	I	E	K	W	V	D	F	A	R	R	L	C	E	H	K	Y	G	N	A	P	R	V	R	I	N	G	H	V	A
Template Known Secondary structure		S	S																													T	T	S			T	T			T	T																											S										S	T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.									.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure																											.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.
Query Sequence		V	N	V	A	A	E	P	A	L	L	E	Q	A	L	G	N	L	L	D	N	A	I	D	F	T	.	.	.	.	.	.	.	.	P	E	S	G	C	I	T	L	S	A	E	V	D	Q	E	H	V	T	L	K	V	L	D	T	G	S	G	I	P	D	Y	A	L	S	R	I	F	E	R	F	Y	S	L	P	R	A	N
Query Conservation																											.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.																																													.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		A	R	F	P	F	I	P	M	P	L	D	Y	I	L	P	E	L	L	K	N	A	M	R	A	T	M	E	S	H	L	D	T	P	Y	N	V	P	D	V	V	I	T	I	A	N	N	D	V	D	L	I	I	R	I	S	D	R	G	G	G	I	A	H	K	D	L	D	R	V	M	D	Y	H	F	T	T	A	.	.	.
Template Known Secondary structure																													T		T	T		T	T	S												S	S										S					G	G	G	T	T	T	T	T	S	T	T					.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	K	S	S	G	L	G	L	A	F	V	S	E	V	A	R	L	F	N	G	E	V	T	L	R	N	V	Q	E	G	G	V	L	A	S	L	R	L	H	R
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	G	F	G	F	G	L	P	T	S	R	A	Y	A	E	Y	L	G	G	S	L	Q	L	Q	S	L	Q	G	I	G	T	D	V	Y	L	R	L	R	H
Template Known Secondary structure		.	.	.			S														T									T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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