Job Description P0AGL5 Confidence 99.33% Date Thu Jan 5 11:29:26 GMT 2012 Rank 27 Aligned Residues 138 % Identity 9% Template c3c0vC_ PDB info PDB header:plant protein Chain: C: PDB Molecule:cytokinin-specific binding protein; PDBTitle: crystal structure of cytokinin-specific binding protein in complex2 with cytokinin and ta6br12 Resolution 1.80 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.		40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.	.	.
Predicted Secondary structure																									.					.									.											.																									.	.
Query SS confidence																									.					.									.											.																									.	.
Query Sequence		V	M	P	Q	I	S	R	T	A	L	V	P	Y	S	A	E	Q	M	Y	Q	L	V	N	.	D	V	Q	S	.	Y	P	Q	F	L	P	G	C	.	T	G	S	R	I	L	E	S	T	P	.	G	Q	M	T	A	A	V	D	V	S	K	A	G	I	S	K	T	F	T	T	R	N	Q	L	.	.	T	S	N	Q	S
Query Conservation																									.					.									.											.																									.	.
Alig confidence																									.					.									.											.																									.	.
Template Conservation
Template Sequence		M	V	K	E	F	N	T	Q	T	E	L	S	V	R	L	E	A	L	W	A	V	L	S	K	D	F	I	T	V	V	P	K	V	L	P	H	I	V	K	D	V	Q	L	I	E	G	D	G	G	V	G	T	I	L	I	F	N	F	L	P	E	V	S	P	S	Y	Q	R	E	E	I	T	E	F	D	E	S	S	H	E
Template Known Secondary structure													S	S											T	T										T	T	T									S	S	S	S	T	T									T	T	S	S	S												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		87	.	.	90	.	.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		I	L	M	N	L	V	D	G	.	.	.	.	.	P	F	K	K	L	I	G	G	W	K	F	T	P	L	S	Q	E	A	C	R	I	E	F	H	L	D	F	E	F	T	N	K	L	I	E	L	A	F	G	R	V	F	K	E	L	A	A	N	M	V	Q	A	F	T	V	R
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.
Template Conservation
Template Sequence		I	G	L	Q	V	I	E	G	G	Y	L	S	Q	G	L	S	Y	Y	K	T	T	F	K	L	S	E	I	E	E	D	K	T	L	V	N	V	K	I	S	Y	D	H	D	S	D	I	E	E	K	V	T	P	T	K	T	S	Q	S	T	L	M	Y	L	R	R	L	E	R	Y
Template Known Secondary structure										G	G	G	G	T	T															T	T														T	T		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions