Job Description P0AGL5 Confidence 99.23% Date Thu Jan 5 11:29:26 GMT 2012 Rank 38 Aligned Residues 143 % Identity 15% Template c2r55B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:star-related lipid transfer protein 5; PDBTitle: human star-related lipid transfer protein 5 Resolution 2.50 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.								70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.
Query Sequence		M	P	Q	I	S	R	T	A	L	V	P	Y	S	A	E	Q	M	Y	Q	L	V	N	D	V	Q	S	Y	P	Q	F	L	P	G	C	T	G	S	R	I	L	E	S	T	P	G	Q	M	T	A	A	V	D	V	S	K	A	.	.	.	.	.	.	.	G	I	S	K	T	F	T	T	R	N	Q	L	T	S	N	Q	S
Query Conservation																																																										.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	L	Y	R	G	E	G	I	V	Y	G	T	L	E	E	V	W	D	C	V	K	P	G	G	L	R	V	K	W	D	E	N	V	T	G	F	E	I	I	Q	S	I	T	D	T	L	C	V	S	R	T	S	T	P	S	A	A	M	K	L	I	S	P	R	D	F	V	D	L	V	L	V	K	R	Y	E	D	G	T
Template Known Secondary structure		S										S	S														S						T	T		S									S	S	S											B	T	T	T	T	B															T	T	S
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.													.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	M	N	L	V	D	G	P	.	.	.	.	.	.	.	.	.	.	.	.	F	K	K	L	I	G	G	W	K	F	T	P	L	S	Q	E	A	C	R	I	E	F	H	L	D	F	E	F	T	N	K	L	I	E	L	A	F	G	R	V	F	K	E	L	A	A	N	M	V	Q	A	F	T	V	R	A	K	E	V
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	S	N	A	T	H	V	E	H	P	L	C	P	P	K	P	G	F	V	R	G	F	N	H	P	C	G	C	F	C	E	P	L	P	P	T	K	T	N	L	V	T	F	F	H	T	D	L	S	G	Y	L	P	Q	N	V	V	D	S	F	F	P	R	S	M	T	R	F	Y	A	N	L	Q	K	A	V	K	Q	F
Template Known Secondary structure												T	T	S				T	T								S																									S	S																											G	G
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		155	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	E
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		212	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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