Job Description P0AGL5 Confidence 97.00% Date Thu Jan 5 11:29:26 GMT 2012 Rank 73 Aligned Residues 127 % Identity 12% Template c2psoC_ PDB info PDB header:structural genomics, unknown function Chain: C: PDB Molecule:star-related lipid transfer protein 13; PDBTitle: human stard13 (dlc2) lipid transfer and protein localization domain Resolution 2.80 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.					.	.
Predicted Secondary structure																																																								.	.	.	.																	.	.	.	.
Query SS confidence																																																								.	.	.	.																	.	.	.	.
Query Sequence		I	S	R	T	A	L	V	P	Y	S	A	E	Q	M	Y	Q	L	V	N	D	V	Q	S	Y	P	Q	F	L	P	G	C	T	G	S	R	I	L	E	S	T	P	G	Q	M	T	A	A	V	D	V	S	K	A	G	.	.	.	.	I	S	K	T	F	T	T	R	N	Q	L	T	S	N	Q	S	.	.	.	.	I	L
Query Conservation																																																								.	.	.	.																	.	.	.	.
Alig confidence																						.	.																																	.	.	.	.																	.	.	.	.
Template Conservation																						.	.
Template Sequence		W	K	A	S	V	E	V	E	A	P	P	S	V	V	L	N	R	V	L	R	.	.	E	R	H	L	W	D	E	D	F	V	Q	W	K	V	V	E	T	L	D	R	Q	T	E	I	Y	Q	Y	V	L	N	S	M	A	P	H	P	S	R	D	F	V	V	L	R	T	W	K	T	D	L	P	K	G	M	C	T	L	V
Template Known Secondary structure									S	S											T	.	.		T	T	T	T		S	S											S	S	S											S	S	S														S			T	T	T
Template Predicted Secondary structure																						.	.
Template SS confidence
		953	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.			.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		M	N	L	V	D	G	P	F	K	K	L	I	G	G	W	K	F	T	P	L	S	Q	E	.	.	.	A	C	R	I	E	F	H	L	D	F	E	F	T	N	K	L	I	E	L	A	F	G	R	V	F	K	E	L	A	A	N	M	V	Q
Query Conservation																									.	.	.
Alig confidence																									.	.	.
Template Conservation
Template Sequence		S	L	S	V	E	H	E	E	A	Q	L	L	G	G	V	R	A	V	V	M	D	S	Q	Y	L	I	E	S	R	L	T	H	I	C	R	I	D	L	K	G	H	S	P	E	W	Y	S	K	G	F	G	H	L	C	A	A	E	V	A	R
Template Known Secondary structure								T	T					S	S																									S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		1031	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions