Return to main results Retrieve Phyre Job Id

Job DescriptionP42906
Confidence98.76%DateThu Jan 5 12:02:04 GMT 2012
Rank66Aligned Residues111
% Identity13%Templated1ra0a2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases Cytosine deaminase catalytic domain
Resolution1.12

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70....... ..80.........90.........100...
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Query Sequence  ADGHHVHPAAMSLCCCCAKERIVLITDAMQAAGMPDGRYTLCGEE. . . . . . . . . VQMHGGVVRTASGGLAGSTLSVDAAV
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Template Sequence  SYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDGVFDPWYPLGTANMLQVL
Template Known Secondary structure  GS
T

TTTT

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TT



B
SSBTTBS




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   252.......260.........270.........280.........290.........300.........310.........320.........330.
 
   104.....110 .........120.........130.........140.....
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Query Sequence  RNMVELT. . . . GVTPAEAIHMASLHPARMLGVDGVLGSLKPGKRAS
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Template Sequence  HMGLHVCQLMGYGQINDGLNLITHHSARTLNLQD. . YGIAAGNSAN
Template Known Secondary structure  TT

SGGGGGGTTT
SS..
SS
TTS


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   332.......340.........350.........360..... ....370.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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