Return to main results Retrieve Phyre Job Id

Job DescriptionP42906
Confidence99.76%DateThu Jan 5 12:02:04 GMT 2012
Rank9Aligned Residues130
% Identity21%Templatec3e0lB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:guanine deaminase; PDBTitle: computationally designed ammelide deaminase
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.. .......60.........70.........80.........90.........100.......
Predicted Secondary structure 







.

























.
Query SS confidence 






















.






















































.
Query Sequence  ELIADGHHVHPAAMSLCCCCAKE. RIVLITDAMQAAGMPDGRYTLCGEEVQMHGGVVRTASGGLAGSTLSVDAAVRNMV.
Query Conservation   

 

 
  
  
         .    



    
   
        
    
        



   
   
    .
Alig confidence 






















.






















......

























.
Template Conservation                             
                   ......
    



               
  
Template Sequence  TVMAHGCYLSAEELNVFHERGASIAHCPNSNLSLSSGFLNVLEVLKH. . . . . . EVKIGLGTDVAGGYSYSMLDAIRRAVM
Template Known Secondary structure 
TT

T

TT




T......T



TTTS



Template Predicted Secondary structure 














......











Template SS confidence 















































































   273......280.........290.........300.........310......... 320.........330.........340......
 
   108.110.........120.........130.........140.........150...
Predicted Secondary structure  ..........



















........................
Query SS confidence  . . . . . . . . . .













































. . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . . . ELTGVTPAEAIHMASLHPARMLGVDGVLGSLKPGKRASVVALDSGL. . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ..........         

  

 


  
      


  

 






   ........................
Alig confidence  ..........













































........................
Template Conservation                

  


   
 


   

    
 
  
  




 
                           
Template Sequence  VSNILLINKVNEKSLTLKEVFRLATLGGSQALGLDGEIGNFEVGKEFDAILINPKASDSPIDLFYGDFFGDISEAVIQKF
Template Known Secondary structure  TTSSSS


TTT
TTTSSS

TTSB


TT
TT
S



TTSSSS
GGGT
Template Predicted Secondary structure 

































Template SS confidence 















































































   347..350.........360.........370.........380.........390.........400.........410.........420......
 
   154.....160.....
Predicted Secondary structure  .......


Query SS confidence  . . . . . . .











Query Sequence  . . . . . . . HVQQIWIQGQLA
Query Conservation  ....... 
  
 
 
  
Alig confidence  .......











Template Conservation          
  
 
 
  
Template Sequence  LYLGDDRNIEEVYVGGKQV
Template Known Secondary structure 

GGGTT
Template Predicted Secondary structure 






Template SS confidence 


















   427..430.........440.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions