Return to main results Retrieve Phyre Job Id

Job DescriptionP42906
Confidence99.74%DateThu Jan 5 12:02:04 GMT 2012
Rank13Aligned Residues78
% Identity14%Templatec2vr2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dihydropyrimidinase; PDBTitle: human dihydropyrimidinase
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130.........140.........150...
Predicted Secondary structure 





























...............
Query SS confidence 
































































. . . . . . . . . . . . . . .
Query Sequence  SGGLAGSTLSVDAAVRNMVELTGVTPAEAIHMASLHPARMLGVDGVLGSLKPGKRASVVALDSGL. . . . . . . . . . . . . . .
Query Conservation     



   
   
             

  

 


  
      


  

 






   ...............
Alig confidence 
































































...............
Template Conservation    
                    

  


   
   
  

     


  

 






      
           
Template Sequence  PNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPKGTRTISAKTHHQAVNF
Template Known Secondary structure 


B

TTTTTTTSS
TTT
TTTSS

STTSB



TTT
SSS
S
Template Predicted Secondary structure 


































Template SS confidence 















































































   346...350.........360.........370.........380.........390.........400.........410.........420.....
 
   154.....160......
Predicted Secondary structure  ..........


Query SS confidence  . . . . . . . . . .












Query Sequence  . . . . . . . . . . HVQQIWIQGQLAS
Query Conservation  .......... 
  
 
 
  
 
Alig confidence  ..........












Template Conservation      
      
  


 



 
Template Sequence  NIFEGMVCHGVPLVTISRGKVVY
Template Known Secondary structure 
TTTT
TT
Template Predicted Secondary structure 






Template SS confidence 






















   426...430.........440........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions