 |
Job Description | P42906 | Confidence | 99.57% | Date | Thu Jan 5 12:02:04 GMT 2012 |
Rank | 51 | Aligned Residues | 58 |
% Identity | 19% | Template | c2ubpC_ |
PDB info |
PDB header:hydrolase | Chain: C: PDB Molecule:protein (urease alpha subunit); |
PDBTitle: structure of native urease from bacillus pasteurii
|
Resolution | 2.00 Å |
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
|
. | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
| . | . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | G | V | T | P | A | E | A | I | H | M | A | S | L | H | P | A | R | M | L | G | V | D | G | V | L | G | S | L | K | P | G | K | R | A | S | V | V | A | L | D | S | G | L | . |
. |
. |
H | V | Q | Q | I | W | I | Q | G | Q | L | A | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|
|   |
|
|
|
|
|
|
|   |   |   | . | . | . |   |
|   |   |
|   |
|   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|   |
|
|
|
|
|   |
|
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
S | D | N | F | R | L | K | R | Y | V | S | K | Y | T | I | N | P | A | I | A | Q | G | I | A | H | E | V | G | S | I | E | E | G | K | F | A | D | L | V | L | W | E | P | K | F | F | G | V | K | A | D | R | V | I | K | G | G | I | I | A | Y |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  | T |
| T | T | T | S | S | S |
|
| T | T | S | B |
|
|  |  |  |  |
| G | G | G | T | T | T | S |
| S |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
398 | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|