|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | C | Y | N | G | M | T | G | L | H | H | R | E | P | G | M | V | G | A | G | L | T | D | K | R | A | W | L | E | L | I | A | D | G | H | H | V | H | P | A | A | M | S | L | C | C | C | C | A | K | E | R | I | V | L | I | T | D | A | M | Q | A | A | G | M | P | D | G | R | Y | T | L | C | G | E | E | V | Q | M | H |
Query Conservation |   |
|
|   |
|
|
|   |   |   |   |
|
|   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
D | Q | Y | G | L | A | V | K | G | H | X | D | Q | L | S | N | L | G | G | S | T | L | A | A | N | F | G | A | L | S | V | D | H | L | E | Y | L | D | P | E | G | I | Q | A | L | A | H | R | . |
. |
. |
G | V | V | A | T | L | L | P | T | A | F | Y | F | L | K | E | T | K | L | P | P | V | V | A | L | R | K | A | G |
Template Known Secondary structure |   |
 |  | T | T |
|  |  |  |  |  |  | S | S | S |
|
|
| S |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | T |
|  |  |  |  |
|  |  |  |  |  |  | T | T |
|
|
|
|
|
|  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
233 | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | |
|
|
. | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | |
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
| . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
G | G | V | V | R | T | A | S | G | G | . |
L | A | G | S | T | L | S | V | D | A | A | V | R | N | M | V | E | L | T | G | V | T | P | A | E | A | I | H | M | A | S | L | H | P | A | R | M | L | G | V | D | G | V | L | G | S | L | K | P | G | K | R | A | S | V | V | A | L | D | S | G | L | . |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   | . |
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|
|   |
|
|
|
|
|
|
|   |   |   | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|
|   |   |   |
|   |
|   |
|   |   |
|
|
|   |   |   |   |
|   |
|   |   |
|   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
V | P | X | A | V | S | S | D | I | N | P | G | T | A | P | I | V | S | L | R | X | A | X | N | X | A | C | T | L | F | G | L | T | P | V | E | A | X | A | G | V | T | R | H | A | A | R | A | L | G | E | Q | E | Q | L | G | Q | L | R | V | G | X | L | A | D | F | L | V | W | N | C | G | H | P | A | E | L | S | Y | L |
Template Known Secondary structure |   |
|
|  |  |  |
|
|
|
| B | T | T | T | B |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T |
| T | T | T | S | S | S |
|
| T | T | S | B |
|
|  |  |  |  | S | S | S |
| T | T |  |  |  |  | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
154 | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |
|
Query SS confidence |   |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
H | V | Q | Q | I | W | I | Q | G | Q | L | A | S | F |
Query Conservation |   |
. | . | . | . |   |
|   |   |
|   |
|   |
|   |   |
|   |   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |
Template Sequence |   |
I | G | V | D | Q | L | V | S | R | V | V | N | G | E | E | T | L | H |
Template Known Secondary structure |   |
| S |
|
|
|  |  |  |  |  |  | T | T |  |  |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . |
  |