 |
Job Description | P42906 | Confidence | 99.70% | Date | Thu Jan 5 12:02:04 GMT 2012 |
Rank | 26 | Aligned Residues | 78 |
% Identity | 17% | Template | c1k1dF_ |
PDB info |
PDB header:hydrolase | Chain: F: PDB Molecule:d-hydantoinase; |
PDBTitle: crystal structure of d-hydantoinase
|
Resolution | 3.01 Å |
|
 |
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
S | G | G | L | A | G | S | T | L | S | V | D | A | A | V | R | N | M | V | E | L | T | G | V | T | P | A | E | A | I | H | M | A | S | L | H | P | A | R | M | L | G | V | D | G | V | L | G | S | L | K | P | G | K | R | A | S | V | V | A | L | D | S | G | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|
|   |
|
|
|
|
|
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|   |   |
|
|   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | N | G | G | P | I | I | E | D | R | V | S | I | L | F | S | E | G | V | K | K | G | R | I | T | L | N | Q | F | V | D | I | V | S | T | R | I | A | K | L | F | G | L | F | P | K | K | G | T | I | V | V | G | S | D | A | D | L | V | I | F | D | P | N | I | E | R | V | I | S | A | E | T | H | H | M | A | V | D | Y |
Template Known Secondary structure |   |
|
|
| B |
|
| T | T | T |  |  |  |  |  |  |  |  | T | G | G | G | T | S | S |
|  |  |  |  |  |  |  |  | T |  |  |  |  |  |  | T | T |
| T | T | T | S | S |
|
| S | T | T | S | B |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| T | T | T |
|
| S | S | S | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
154 | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | V | Q | Q | I | W | I | Q | G | Q | L | A | S |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |
|   |
|   |   |
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|   |
Template Sequence |   |
N | A | F | E | G | M | K | V | T | G | E | P | V | S | V | L | C | R | G | E | F | V | V |
Template Known Secondary structure |   |
| T | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
416 | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|