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Job DescriptionP13482
Confidence98.47%DateThu Jan 5 11:33:37 GMT 2012
Rank13Aligned Residues291
% Identity18%Templated2fbaa1
SCOP infoalpha/alpha toroid Six-hairpin glycosidases Glucoamylase
Resolution1.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   156... 160.........170.........180.........190.... .... .200.
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Query Sequence  VYYW. . DSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHI. . . . . . PNGN. . . . . . . . . . . . . . . . . . . . . . . . . . RSY
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Template Sequence  YYQWTRDSAITFLTVLSELEDNNFNTTLAKAVEYYINTSYNLQRTSNPSGSFDDENHKGLGEPKFNTDGSAYTGAWGRP.
Template Known Secondary structure 
STTT
TS
BTTB
TTSGGGGGGG


TTS
B

S

S

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   64.....70.........80.........90.........100.........110.........120.........130.........140..
 
   202.......210.........220.. .......230.........240.........250.........260....
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Query Sequence  YLSRSQPPFFALMVELLAQHE. . . . . . . . . . . . . . . . . GDAALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGT
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Template Sequence  . . QNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYKNIIKPDLEYVIGYWDSTGFDLWEEN. . . . . . . .
Template Known Secondary structure  ..BTTSTT

SSTT
TT
S
SSTTTS

TTS

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   143......150.........160.........170.........180.........190.........200.........210..
 
   265....270.........280.........290.........300.........310.........320.........330.........340....
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Query Sequence  LLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKM
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QGRHFFTS. . . . . . . . . . . . . . . . . . . . . . LVQQKA
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   213......220 ......
 
   345....350.........360.........370........ .380......... 390.........400.........410.
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Query Sequence  EKILARASKAAGDNAMANQYETLANARQKGIEKY. . . LWNDQQGWYAD. YDLKSHKVRNQLTAAALFPLYV. . . . . . . . .
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Template Sequence  LAYAVDIAKSFDDGDFANTLSSTASTLESYLSGSDGGFVNTDVNHIVENPDLLQQNSRQGLDSATYIGPLLTHDIGESSS
Template Known Secondary structure  TT
STTT

TTTT
SSTTS

S

TS
TTS


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   227..230.........240.........250.........260.........270.........280.........290.........300......
 
   412.......420.........430.........440.........450 .........460.........470...
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Query Sequence  . . NAAAKDRANKMATATKTHLLQPGGLNTTSVKSGQQWDAP. . . . . . . . . . . . NGWAPLQWVATEGLQNYGQKEVA. . . .
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Template Sequence  TPFDVDNEYVLQSYYLLLEDNKDRYSVNSAYSAGAAIGRYPEDVYNGDGSSEGNPWFLATAYAAQVPYKLAYDAKSASND
Template Known Secondary structure 
S

TT

GGGTT
SS




S
TT

B
SSSBSS


BT

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   307..310.........320.........330.........340.........350.........360.........370.........380......
 
   474.....480.........490.........500......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MDISWHFLTNVQHTYDREKKLVEKYDVSTTGTG
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Template Sequence  ITINKINYDFFNKYIVDLSTINSAYQSSDSVTIKSGSDEFNTVADNLVTFGDSFLQVILDHINDDGSLNEQLNRYTGYST
Template Known Secondary structure  GGGT

GGGT
TTGGGSS
TTSS
TTS


S
TTT

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   387..390.........400.........410.........420.........430.........440.........450.........460......
 
   507..510.........520.........530
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Query Sequence  GGGGEYPLQDGFGWTNGVTLKMLD
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Template Sequence  GA. . . . . . . YSLTWSSGALLEAIR
Template Known Secondary structure  SS.......TT
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   467. .470.........480...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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