Job Description P13482 Confidence 99.85% Date Thu Jan 5 11:33:37 GMT 2012 Rank 8 Aligned Residues 282 % Identity 13% Template c3cihA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative alpha-rhamnosidase; PDBTitle: crystal structure of a putative alpha-rhamnosidase from2 bacteroides thetaiotaomicron Resolution 2.33 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		F	T	M	L	G	L	A	E	S	G	H	W	D	K	V	A	D	M	V	A	N	F	A	H	E	I	D	T	Y	G	H	I	P	N	G	N	R	S	Y	Y	L	S	R	S	Q	P	P	F	F	A	L	M	V	E	L	L	A	Q	H	E	G	D	.	A	A	L	K	Q	Y	L	P	Q	M	Q	K	E	Y	A	Y	W
Query Conservation																																																																.
Alig confidence																																							.	.	.	.	.	.	.																			.
Template Conservation																																							.	.	.	.	.	.	.
Template Sequence		S	Y	L	X	N	Y	Y	L	F	F	D	S	E	S	V	K	R	T	I	W	L	L	R	G	K	D	P	V	T	S	H	S	N	T	I	X	D	.	.	.	.	.	.	.	Y	T	F	Y	W	F	L	S	V	Y	D	Y	Y	X	Y	S	G	D	R	H	F	V	N	Q	L	Y	P	R	X	Q	T	X	X	D	Y	V
Template Known Secondary structure								T	T	T																	S	S			S	S	G	G	G	B			.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.								.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	G	V	E	N	L	Q	A	G	Q	Q	E	K	R	V	V	K	L	Q	D	G	T	L	L	N	R	Y	W	D	D	R	D	T	P	R	P	E	S	W	V	E	D	I	A	T	A	K	S	N	P	N	R	P	A	T	E	I	Y	R	D	L	R	S	A	A	A	S	G	W	D	F	S	S	R	W	M	D	N	P
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	R	T	N	K	N	G	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	G	X	S	G	D	W	V	F	V
Template Known Secondary structure			T	T	B		T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B				T	T		B			S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		421	.	.	.	.	.	.	.	.																																																													430	.	.	.	.	.	.	.	.	.	440
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	L	N	T	L	R	T	T	S	I	V	P	V	D	L	N	S	L	M	F	K	M	E	K	I	L	A	R	A	S	K	A	A	G	D	N	A	M	A	N	Q	Y	E	T	L	A	N	A	R	Q	K	G	I	E	K	Y	L	W	N	D	Q	Q	G	W	Y	A	D	Y	D	L	K	S	H	K	V	R	N	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	W	A	D	G	Y	L	D	K	K	G	E	L	S	F	E	Q	V	L	F	C	R	S	L	E	T	X	A	L	C	A	D	L	V	G	D	K	D	G	Q	Q	K	Y	E	K	L	A	S	A	L	K	A	K	L	E	P	T	F	W	N	N	Q	K	Q	A	F	V	H	N	C	V	D	G	R	Q	S	D	A	V	T
Template Known Secondary structure					T	T					S	S																								T																										T	T	T	T				S				T	T				S
Template Predicted Secondary structure
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.		.	.	.	480
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		T	A	A	A	L	F	P	L	Y	V	N	A	A	A	K	D	R	A	N	K	M	A	T	A	T	K	T	H	L	L	Q	P	G	G	L	N	T	T	S	V	K	S	G	Q	Q	W	D	A	P	N	G	W	A	P	L	Q	W	V	A	T	E	G	L	Q	N	Y	G	Q	K	E	V	A	M	D	I	.	S	W	H	F
Query Conservation																																																																													.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	Y	A	N	X	F	S	V	F	F	D	Y	L	N	A	D	K	Q	Q	A	I	K	Q	S	V	L	L	N	D	E	I	L	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	P	Y	X	R	F	Y	E	L	E	A	L	C	A	L	G	E	Q	E	T	V	X	K	E	X	K	A	Y	W
Template Known Secondary structure											T	T		S												T	T	T		T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S														T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.																	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.				.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		L	T	N	V	Q	H	T	Y	D	R	E	K	K	L	V	E	K	Y	D	V	S	T	T	G	T	G	G	G	G	G	E	Y	P	L	Q	D	G	.	.	.	F	G	W	T	N	G	V	T	L	K	M	L	D
Query Conservation																																							.	.	.
Alig confidence									.	.	.																												.	.	.
Template Conservation									.	.	.
Template Sequence		G	G	X	L	K	A	G	.	.	.	A	T	S	F	W	E	K	Y	N	P	E	E	S	G	T	Q	H	L	A	X	Y	G	R	P	Y	G	K	S	L	C	H	A	W	G	A	S	P	I	Y	L	L	G	K
Template Known Secondary structure						T	T	T	.	.	.		S	S			S				T	T			G	G	G	G	G		B	T	T	B	T	T		S		S	S	B	G	G	G		T
Template Predicted Secondary structure									.	.	.
Template SS confidence
		585	.	.	.	.	590	.				.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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