Job Description P13482 Confidence 100.00% Date Thu Jan 5 11:33:37 GMT 2012 Rank 4 Aligned Residues 348 % Identity 21% Template c2z07A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein ttha0978; PDBTitle: crystal structure of uncharacterized conserved protein from2 thermus thermophilus hb8 Resolution 2.10 Å

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		143	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.						.	.	.	.	200	.	.	.	.	.						.	.	.	.	210	.
Predicted Secondary structure										.																																														.	.	.	.	.											.	.	.	.	.
Query SS confidence										.																																														.	.	.	.	.											.	.	.	.	.
Query Sequence		P	E	P	Y	V	V	P	G	.	G	R	F	R	E	V	Y	Y	W	D	S	Y	F	T	M	L	G	L	A	E	S	G	H	W	D	K	V	A	D	M	V	A	N	F	A	H	E	I	D	T	Y	G	H	I	P	.	.	.	.	.	N	G	N	R	S	Y	Y	L	S	R	.	.	.	.	.	S	Q	P	P	F	F
Query Conservation										.																																														.	.	.	.	.											.	.	.	.	.
Alig confidence										.																																														.	.	.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		R	G	A	F	T	V	P	A	H	G	L	Y	P	Y	Q	W	L	W	D	S	A	F	I	A	L	G	W	T	Q	V	D	W	E	R	A	W	Q	E	L	L	C	L	F	D	Y	G	Q	G	P	D	G	X	L	P	H	I	V	F	H	E	Q	S	R	D	Y	F	A	Q	P	A	T	S	G	I	T	Q	P	P	V	V
Template Known Secondary structure			S	S		B		S	S	T	T			S															T	T	T																			T	T					S						S												S	S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.		.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure															.		.	.	.	.
Query SS confidence															.		.	.	.	.
Query Sequence		A	L	M	V	E	L	L	A	Q	H	E	G	D	.	A	.	.	.	.	A	L	K	Q	Y	L	P	Q	M	Q	K	E	Y	A	Y	W	M	D	G	V	E	N	L	Q	A	G	Q	Q	E	K	R	V	V	K	L	Q	D	G	T	L	L	N	R	Y	W	D	D	R	D	T	P	R	P	E	S	W	V	E	D	I	A
Query Conservation															.		.	.	.	.
Alig confidence															.		.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	V	V	R	Y	L	Y	E	K	D	P	D	R	D	R	A	R	E	R	A	R	Y	L	F	P	K	L	L	A	F	H	R	W	L	Y	H	A	R	D	P	Y	R	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	V	I	V	H	P	W	E	S	G	X	D	N	S	P	A	W	D	K	P
Template Known Secondary structure													S																													T	T			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.				B	S	S	G	G	G	G	T		T	T		G	G	G
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.															.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		287	.	.	290	.	.	.				.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		T	A	K	S	N	P	N	.	.	.	R	P	A	T	E	I	Y	R	D	L	R	S	A	A	A	S	G	W	D	F	S	S	R	W	M	D	N	P	Q	Q	L	N	T	L	R	T	T	S	I	V	P	V	D	L	N	S	L	M	F	K	M	E	K	I	L	A	R	A	S	K	A	A	G	D	N	A	M	A	N	Q
Query Conservation									.	.	.
Alig confidence									.	.	.																								.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.																																					.	.	.
Template Sequence		L	S	R	V	P	V	K	H	V	N	P	D	Y	D	R	Y	L	S	L	L	Y	L	F	R	R	L	E	Y	D	P	R	E	I	.	.	.	.	.	.	.	.	Y	R	Q	S	P	F	K	V	V	D	V	G	F	N	A	I	L	Q	R	A	N	R	D	L	Y	A	L	A	V	L	L	Q	E	D	P	Y	.	.	.
Template Known Secondary structure				T						S																	T	T	T						.	.	.	.	.	.	.	.					S																										T	T					.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.																																					.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.									.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.										.	.	.	.
Query SS confidence																																																																				.										.	.	.	.
Query Sequence		Y	E	T	L	A	N	A	R	Q	K	G	I	E	K	Y	L	W	N	D	Q	Q	G	W	Y	A	D	Y	D	L	K	S	H	K	V	R	N	Q	L	T	A	A	A	L	F	P	L	Y	V	N	A	A	A	K	D	R	A	N	K	M	A	T	A	T	K	T	H	.	L	L	Q	P	G	G	L	N	T	.	.	.	.
Query Conservation																																																																				.										.	.	.	.
Alig confidence																																																																				.										.	.	.	.
Template Conservation
Template Sequence		E	I	E	E	W	I	V	R	G	E	V	G	L	E	A	L	W	D	R	E	A	G	F	Y	F	S	W	D	L	V	A	G	E	P	I	A	V	K	T	S	A	G	F	L	P	L	F	A	G	T	P	H	Q	G	R	A	S	L	L	A	Q	E	A	E	R	W	G	E	K	A	R	Y	L	L	P	S	V	D	P	T
Template Known Secondary structure																	T			T	T	T	T							T	T	T	T							B	G	G	G	G	T					T		S																T	T	T		S	S	S		B	S	B		T	T
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
			439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	T	S	V	K	S	G	Q	Q	W	D	A	P	N	G	W	A	P	L	Q	W	V	A	T	E	G	L	Q	N	Y	G	Q	K	E	V	A	M	D	I	S	W	H	F	L	T	N	V	Q	H	T	Y	D	R	E	K	K	L	V	E	K	Y	D	V	S	T	T	G	T	G	G	G	G	G	E	Y	P	L	Q	D	G
Query Conservation		.
Alig confidence		.													.																																.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation															.																																.	.	.	.	.																.	.	.	.	.	.	.
Template Sequence		S	P	F	F	E	P	G	R	Y	W	R	G	P	.	V	W	I	N	V	N	W	X	V	A	E	G	F	R	D	Y	G	F	A	A	L	A	A	R	L	K	A	D	A	L	A	.	.	.	.	.	L	X	E	R	E	G	F	R	E	Y	Y	D	P	L	T	.	.	.	.	.	.	.	G	Q	G	R	G	G	E	G
Template Known Secondary structure		S	T	T			T	T	S	T	T	S	S		.	B															T	T															.	.	.	.	.							S						T	T	T	.	.	.	.	.	.	.								S
Template Predicted Secondary structure															.																																.	.	.	.	.																.	.	.	.	.	.	.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.						.	.	.	.	.	390	.	.	.	.	.	.	.	.	.								400	.	.	.	.	.	.	.
		518	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	W	T	N	G	V	T	L	K	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	W	S	A	A	L	A	L	F	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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