Job Description P13482 Confidence 97.55% Date Thu Jan 5 11:33:37 GMT 2012 Rank 22 Aligned Residues 312 % Identity 14% Template c2rdyB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:bh0842 protein; PDBTitle: crystal structure of a putative glycoside hydrolase family2 protein from bacillus halodurans Resolution 2.03 Å

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		150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																													190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	R	F	R	E	V	Y	Y	W	D	.	.	S	Y	F	T	M	L	G	L	A	E	S	G	H	W	D	K	V	A	D	M	V	A	N	F	A	H	E	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Y	G	H	I	P	N	G	N	R
Query Conservation													.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	P	W	S	S	N	Y	T	L	N	I	N	A	E	X	N	Y	W	P	A	E	T	C	N	L	A	E	L	H	K	P	L	I	H	F	I	E	R	L	A	A	N	G	K	K	T	A	E	I	N	Y	G	A	R	G	W	V	A	H	H	N	A	D	L	W	G	Q	T	A	P	V	G	D	F	G	H	G	D	P
Template Known Secondary structure		T		G	G	G	G				T	T	T						T	T	T	T	T	T	T	T		G	G	G	G																									S	S					S				T	T				S			B	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																											.					.
Query SS confidence																											.					.
Query Sequence		S	Y	Y	L	S	R	S	Q	P	P	F	F	A	L	M	V	E	L	L	A	Q	H	E	G	D	.	A	A	L	K	.	Q	Y	L	P	Q	M	Q	K	E	Y	A	Y	W	M	D	G	V	E	N	L	Q	A	G	Q	Q	E	K	R	V	V	K	L	Q	D	G	T	L	L	N	R	Y	W	D	D	R	D	T	P	R
Query Conservation																											.					.
Alig confidence																											.					.																																									.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		V	W	A	F	W	P	X	G	G	V	W	L	T	Q	H	L	W	E	H	Y	T	F	G	E	D	E	A	Y	L	R	D	T	A	Y	P	I	X	K	E	A	A	L	F	C	L	D	W	L	I	E	N	E	A	G	Y	L	V	T	S	P	S	T	S	P	E	Q	R	F	R	I	G	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T																									T																				T	T	S					S	S	B		B	T	T	B					T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		P	E	S	W	V	E	D	I	A	T	A	K	S	N	P	N	R	P	A	T	E	I	Y	R	D	L	R	S	A	A	A	S	G	W	D	F	S	S	R	W	M	D	N	P	Q	Q	L	N	T	L	R	T	T	S	I	V	P	V	D	L	N	S	L	M	F	K	M	E	K	I	L	A	R	A	S	K	A	A	G	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	G	Y	A	V	S	S	A	T	T	X	D	L	S	L	I	A	E	C	F	D	N	C	I	Q	A	A	K	R	L	S	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T						B	S																								T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																	513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.					.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		D	N	A	M	A	N	Q	Y	E	T	L	A	N	A	R	Q	K	G	I	E	K	Y	L	W	N	D	Q	Q	G	W	.	.	.	.	Y	A	D	Y	D	L	K	S	H	K	V	R	N	Q	L	T	A	A	A	L	F	P	L	Y	V	N	A	A	A	K	D	R	A	N	K	M	A	T	A	T	K	T	H	L	L	Q
Query Conservation																																.	.	.	.
Alig confidence																			.	.	.	.	.									.	.	.	.																								.	.
Template Conservation																			.	.	.	.	.																																				.	.
Template Sequence		D	E	D	F	V	K	A	L	S	D	A	K	Q	R	L	L	P	.	.	.	.	.	L	Q	I	G	K	R	G	Q	L	Q	E	W	S	N	D	F	E	D	E	D	V	H	H	R	H	V	S	H	L	V	G	I	Y	P	G	.	.	R	L	I	T	E	Q	S	A	P	N	L	F	E	A	A	K	T	S	L	E	I
Template Known Secondary structure																B			.	.	.	.	.			B		T	T	S	S	B		S	S	S	S					S		T	T		S			G	G	G	T	T	T	T	T		.	.		S			T	T	T
Template Predicted Secondary structure																			.	.	.	.	.																																				.	.
Template SS confidence
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.						.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.			.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	G	L	N	T	T	S	V	K	S	G	Q	Q	W	D	A	P	N	G	W	A	P	L	Q	W	V	A	T	E	G	L	Q	N	Y	G	Q	K	E	V	A	M	D	I	S	W	H	F	L	T	N	V	Q	H	T	Y	D	R	E	K	K	L	V	E	K	Y	D	V	S	T	T	G	T	G	G	G	G	G	E	Y
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																				.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																				.	.	.	.	.
Template Sequence		R	G	D	E	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	S	L	G	W	K	I	S	L	W	A	.	.	R	F	K	D	G	N	R	C	E	R	L	L	S	N	X	L	T	L	I	.	.	.	.	.	K	E	D	E	S	X	Q	H	R	G	G	V	Y	A	N	L	F	G	A	H	P	P	F
Template Known Secondary structure				S				.	.	.	.	.	.	.	.	.	.	.	.	.													.	.		T	T													S	S	B		.	.	.	.	.		T	T				T	T						T	T					S	S	S	B
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																				.	.	.	.	.
Template SS confidence
		619	620	.	.	.	.														.	.	.	.	.	630	.	.	.	.	.	.			.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.						.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	Q	D	G	F	G	W	T	N	G	V	T	L	K	M	L	D	L	I	C	P	K	E	Q	P	C	D	N	V	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	D	G	N	F	S	A	T	A	G	I	A	E	X	L	L	Q	S	H	Q	G	Y	L	E	F	L	P	A	L	P	D
Template Known Secondary structure			T																		S	S	S	S				S	T	T			T
Template Predicted Secondary structure
Template SS confidence
		679	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions