Job Description P13482 Confidence 99.81% Date Thu Jan 5 11:33:37 GMT 2012 Rank 9 Aligned Residues 282 % Identity 14% Template c2cqtA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cellobiose phosphorylase; PDBTitle: crystal structure of cellvibrio gilvus cellobiose phosphorylase2 crystallized from sodium/potassium phosphate Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.										.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	R	F	R	E	V	Y	Y	W	D	S	Y	F	T	M	L	G	L	A	E	S	G	H	W	D	K	V	A	D	M	V	A	N	F	A	H	E	I	D	T	Y	G	H	I	P	N	.	.	.	.	.	.	.	.	.	G	N	R	S	Y	Y	L	S	R	S	Q	P	P	F	F	A	L	M	V	E	L	L	A	Q
Query Conservation																																																	.	.	.	.	.	.	.	.	.
Alig confidence																									.																								.	.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		T	G	I	G	R	G	M	G	F	R	D	S	N	Q	D	L	L	G	F	V	H	L	I	.	P	E	R	A	R	E	R	I	I	D	I	A	S	T	Q	F	A	D	G	S	A	Y	H	Q	Y	Q	P	L	T	K	R	G	N	N	D	I	G	S	G	F	N	D	D	P	L	W	L	I	A	G	V	A	A	Y	I	K
Template Known Secondary structure		B	S	S	S														T	T	T	T	T		.													T	T	B		T	T	S		B		S				T	T	T	T					T	T		S		B	T	T
Template Predicted Secondary structure																									.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		221	.	.	.		.	.	.	.	.														230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure						.						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	E	G	D	.	A	A	L	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	P	Q	M	Q	K	E	Y	A	Y	W	M	D	G	V	E	N	L	Q	A	G	Q	Q	E	K	R	V	V	K	L	Q	D	G	T	L	L	N	R	Y	W	D	D	R	D	T	P	R	P	E	S	W	V	E	D	I	A
Query Conservation						.						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.						.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.																									.	.	.	.
Template Conservation																																																		.	.	.	.																									.	.	.	.
Template Sequence		E	S	G	D	W	G	I	L	D	E	P	V	P	F	D	N	E	P	G	S	E	V	P	L	F	E	H	L	T	R	S	F	Q	F	T	V	Q	N	R	G	P	H	G	L	P	L	I	G	.	.	.	.	R	A	D	W	N	D	C	L	N	L	N	C	F	S	T	T	P	G	E	S	F	Q	T	T	.	.	.	.
Template Known Secondary structure						G	G	G	G	G	S				S	T	T		T	T																		T		B		T	T	S	S	B	B		B	.	.	.	.	T		S	S	S	T	T			T	T						T	T	S		T	T	T	S	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.																									.	.	.	.
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.					.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	K	S	N	P	N	R	P	A	T	E	I	Y	R	D	L	R	S	A	A	A	S	G	W	D	F	S	S	R	W	M	D	N	P	Q	Q	L	N	T	L	R	T	T	S	I	V	P	V	D	L	N	S	L	M	F	K	M	E	K	I	L	A	R	A	S	K	A	A	G	D	N	A	M	A	N	Q	Y	E	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	Q	A	G	G	V	A	E	S	V	F	I	A	A	Q	F	V	L	Y	G	A	E	Y	A	T	L	A	E	R	R	G	L	A	D	V	A	T	E	A	R	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S																											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																								509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.			.	.	.	.	.	.					390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.								.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure																			.	.							.	.	.	.																													.	.	.	.	.	.	.
Query SS confidence																			.	.							.	.	.	.																													.	.	.	.	.	.	.
Query Sequence		L	A	N	A	R	Q	K	G	I	E	K	Y	L	W	N	D	Q	.	.	Q	G	W	Y	A	D	.	.	.	.	Y	D	L	K	S	H	K	V	R	N	Q	L	T	A	A	A	L	F	P	L	Y	V	N	A	A	A	K	D	.	.	.	.	.	.	.	R	A	N	K	M	A	T	A	T	K	T	H	L	L	Q	P
Query Conservation																			.	.							.	.	.	.																													.	.	.	.	.	.	.
Alig confidence																			.	.							.	.	.	.																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	V	D	E	V	R	A	A	V	L	E	H	G	W	D	G	Q	W	F	L	R	A	Y	D	Y	Y	G	N	P	V	G	T	D	A	K	P	E	G	K	I	W	I	E	P	Q	G	F	A	V	M	A	G	I	G	V	G	E	G	P	D	D	A	D	A	P	A	V	K	A	L	D	S	V	N	E	M	L	G	T	P
Template Known Secondary structure														S	B		S	S	S	B						T	T	S				S		T	T	S	S	S	S													T	T	T	T			S		T	T		T	T	S																T
Template Predicted Secondary structure
Template SS confidence
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
		434	.	.	.																.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	V	K	S	G	Q	Q	W	D	A	P	N	G	W	A	P	L	Q	W	V	A	T	E	G	L	Q	N	Y	G	Q	K	E	V	A	M	D	I	S	W	H
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																	.
Template Sequence		H	G	L	V	L	Q	Y	P	A	Y	T	T	Y	Q	I	E	L	G	E	V	S	T	Y	P	P	G	Y	K	E	N	G	.	G	I	F	C	H	N	N	P	W	V	I	I	A	E	T	V	V	G	R	G	A	Q	A	F	D	Y	Y	K	R
Template Known Secondary structure		T				S			S			S	S			T	T	T	T	T	G	G	G	S		T	T	B	T	T	B	T	.	S			G	G	G												T
Template Predicted Secondary structure																																	.
Template SS confidence
		631	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.		.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions