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Job DescriptionP13482
Confidence97.68%DateThu Jan 5 11:33:37 GMT 2012
Rank18Aligned Residues325
% Identity18%Templatec1ug9A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glucodextranase; PDBTitle: crystal structure of glucodextranase from arthrobacter globiformis i42
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   148.150.........160.........170.........180.........190 .........200.........210 ........
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Query Sequence  VPGGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDT. YGHIPNGNRSYYLSRSQPPF. . . . . . . . FALMVELL
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Template Sequence  THREGYHAVWARDMYQSVTALLAAGDEEAAARGVEWLFTYQQQPDGHFPQT. . . SRVDGTIGQNGIQLDETAFPILLANQ
Template Known Secondary structure  S


TT
SB
T
T

TTS


S
...B
TT

B





T
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   321........330.........340.........350.........360.........370. ........380.........390.......
 
   219220.........230.........240.........250.........260.........270.........280.........290........
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Query Sequence  AQHEGDAALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVEDIATAKSNPNRPATE
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Template Sequence  IGRTDAGFYRNE. . . LKPAADYLVAAGPKTPQE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T


T...
S
BSS
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   398.400......... 410.........420.......
 
   299300.........310.........320.........330.........340.........350.........360.........370........
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Query Sequence  IYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKY
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Template Sequence  . . . . . . . . . . . . . . . . . RWEETGGY. . . . . . . . . . STSTLASQIAALAAAADIAGKNGDAGSAAVYRATADEWQRSTEKW
Template Known Secondary structure  .................TTSS

B..........TT
TT
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   428.430..... ....440.........450.........460.........470.........480
 
   379380... ......390........ .400.........410.........420.........430.. .
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Query Sequence  LWNDQ. . . . QGWYADYDLKSHKVR. . . . . . . . . . . . . . . . . . . NQLTAAALFPLYVNAAAKDRANKMATATKTHLLQ. . P
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Template Sequence  MFTTNGPVGDGKYYLRISATGNPNDGATRDWGNGAGVHPENAVLDGGFLEFVRLGVKAPADPYVADSLAETDASISQETP
Template Known Secondary structure  SS
SSTTS

SSSS
TTS


STT

GGG

BGGGGTTSS
TT
T
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   481........490.........500.........510.........520.........530.........540.........550.........560
 
   434.....440...... ...450 .........460.........470.........480.........490....... ..500.
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Query Sequence  GGLNTTSVKSGQQ. . . . . . . . WDAP. . . NGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEK. YDVS
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Template Sequence  GGRMWHRYTYDGYGEKADGSPWDGTGIGRLWPLLSGERGEYALANGQD. . . . . . ALPYLETMHSAANAGYMIPEQVWDRD
Template Known Secondary structure  T
SBTT


S

TTS


SS




B
TTT

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T

TT



S
B


S
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   561........570.........580.........590.........600........ .610.........620.........630....
 
   502...... .510.........520.........530.........540.........550.........560....
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Query Sequence  TTGTGGG. . GGEYPLQDGFGWTNGVTLKMLDLICPKEQPCDNVPATRPTVKSATTQPSTKEAQPT
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Template Sequence  EPTSYGHELGRSTGSASPLSWAMAQYVRLAAGVKAGA. . . . . . PVETPQNVAARYAAGTPLSSPE
Template Known Secondary structure  S

SS


TTSB
SS
B

TS......
SSS
TSSS





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   635....640.........650.........660.........670. ........680.........690...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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