Job Description P76658 Confidence 100.00% Date Thu Jan 5 12:25:18 GMT 2012 Rank 31 Aligned Residues 299 % Identity 16% Template d2ajra1 SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 2.46

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																																					.
Query SS confidence									.																																					.
Query Sequence		G	V	M	V	V	G	D	.	V	M	L	D	R	Y	W	Y	G	P	T	S	R	I	S	P	E	A	P	V	P	V	V	K	V	N	T	I	E	E	R	P	G	G	A	A	.	N	V	A	M	N	I	A	S	L	G	A	N	A	R	L	V	G	L	T	G	I	D	D	A	A	R	A	L	S	K	S	L	A	D	V
Query Conservation									.																																					.
Alig confidence									.									.	.																											.																							.
Template Conservation																		.	.																																																		.
Template Sequence		X	V	L	T	V	T	L	N	P	A	L	D	R	E	I	F	.	.	I	E	D	F	Q	V	N	R	L	Y	R	I	N	D	L	S	K	T	Q	X	S	P	G	G	K	G	I	N	V	S	I	A	L	S	K	L	G	V	P	S	V	A	T	G	F	V	G	G	Y	.	X	G	K	I	L	V	E	E	L	R	K	I
Template Known Secondary structure								S	S									.	.		T	T			S	S							S	G	G	G							S												T	T													.
Template Predicted Secondary structure																		.	.																																																		.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.
Predicted Secondary structure											.																									.	.																																				.	.
Query SS confidence											.																									.	.																																				.	.
Query Sequence		N	V	K	C	D	F	V	S	V	.	P	T	H	P	T	I	T	K	L	R	V	L	S	R	N	Q	Q	L	I	R	L	D	F	E	.	.	E	G	F	E	G	V	D	P	Q	P	L	H	E	R	I	N	Q	A	L	S	S	I	G	A	L	V	L	S	D	Y	A	K	G	A	L	.	.	A	S	V	Q	Q	M	I
Query Conservation											.																									.	.																																				.	.
Alig confidence											.																									.	.																																				.	.
Template Conservation
Template Sequence		S	K	L	I	T	T	N	F	V	Y	V	E	G	E	T	R	E	N	I	E	I	I	D	E	K	N	K	T	I	T	A	I	N	F	P	G	P	D	V	T	D	X	D	V	N	H	F	L	R	R	Y	K	X	T	L	S	K	V	D	C	V	V	I	S	G	S	I	P	P	G	V	N	E	G	I	C	N	E	L	V
Template Known Secondary structure			T	T									S	S											T	T	T	T																													T	T		S						S				T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.											.
Query SS confidence																							.	.	.	.											.
Query Sequence		Q	L	A	R	K	A	G	V	P	V	L	I	D	P	K	G	T	D	F	E	R	.	.	.	.	Y	R	G	A	T	L	L	T	P	N	.	L	S	E	F	E	A	V	V	G	K	C	K	T	E	E	E	I	V	E	R	G	M	K	L	I	A	D	Y	E	L	S	A	L	L	V	T	R	S	E	Q	G	M	S	L
Query Conservation																							.	.	.	.											.
Alig confidence																							.	.	.	.											.																														.
Template Conservation																																																																			.
Template Sequence		R	L	A	R	E	R	G	V	F	V	F	V	E	Q	T	P	R	L	L	E	R	I	Y	E	G	P	E	F	P	N	V	V	K	P	D	L	R	G	N	H	A	S	F	L	G	V	D	L	K	T	F	D	D	Y	V	K	L	A	E	K	L	A	E	K	S	.	Q	V	S	V	V	S	Y	E	V	K	N	D	I	V
Template Known Secondary structure							T	T																		S	S				S							T	T			S		B	T	T	B				S															S	.	S							T	T	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		L	Q	P	G	K	A	P	L	H	M	P	T	Q	A	Q	E	V	Y	D	V	T	G	A	G	D	T	V	I	G	V	L	A	A	T	L	A	.	A	G	N	S	L	E	E	A	C	F	F	A	N	A	A	A	G	V	V	V	G	K	L	G	T	S	T	V	S	P	I	E	L	E	N	A	V	R	G
Query Conservation																																						.
Alig confidence																																						.
Template Conservation
Template Sequence		A	T	R	E	G	V	W	L	I	R	S	K	E	E	I	D	T	S	H	L	L	G	A	G	D	A	Y	V	A	G	X	V	Y	Y	F	I	K	H	G	A	N	F	L	E	X	A	K	F	G	F	A	S	A	L	A	A	T	R	R	K	E	K	Y	X	P	D	L	E	A	I	K	K	E	Y	D	H
Template Known Secondary structure				S	S								S	S				G	G	G		T	T																		S																	T	T	S	S	S											T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions